Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0954 ATGCAGAGACGCAAGTGGATTCCGTTGGTATTGCTGAGAAAGTGGCTCACTGCAGCAATATGCTTAATAACGTTCGTGGCTCTCTTCTCTGTTCATGTTCACATTGTCCCTTCCTCTAAGGATCGCCGGTTCAACGACAAGTTCCCCAAGCCTCAGGATCTGCAAAGCTGGACGCGAGAGCTTGCTCCGCCTCATTTATCCAAAGCTCCTCTTCCAACTCCCAAGTTGAATGGATCCAGAAAAGGGTATTCAGATTACGAGAAGTTGTGGAAGCCTCCATCAAATCGTGGGTTTCTGACCTGTACAAAGGCTACACCTAATTACACCAGTCCTGCTGAGTCACGAGGATATCTTTTAGTTCATACAAATGGCGGGCTCAACCAAATGCGCTCTGGGATATGTGACATGGTAGCTGTAGCTCGTATCATAAATGCTACTCTTGTCATTCCAGAACTTGATAAAAGATCATTTTGGCAAGATACTAGCAATTTTTCTGATATTTTTGATGAGGAACATTTTATGAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAGCTTCCGAACAAGGTGGTTAATGCAACCAGAGTGGTCAAGCAATTCATAAGCTGGTCAGGCATGGATTACTATGAGAATGAGATTGCTAGCTTGTGGGAAGATTACCAAGTAATTCAAGCTTCAAAATCTGATTCACGATTAGCGAACAACAATCTACCTCCGGACATTCAAAAGCTTCGCTGCCGAGCTTGTTATGAAGCTCTTCGCTTCTCTCCTCACATTGAACAAATGGGAAAATTGTTGGTGGAGAGGATGAGGTCATTTGGTCCTTATATTGCGTTGCATTTACGCTATGAGAAGGATATGCTTGCATTTAGTGGGTGCACACATGATTTATCTCCTGATGAAGCTGAAGAGCTGAGGATGATCAGAGAGAACACTTCCTATTGGAAAATAAAGGACATTGATCCCATAGAACAGAGGTCCAAAGGGCTTTGCCCCTTAACTCCAAAGGAAGTTGGGATTTTTCTTACTGCTCTTGGATACCCGTCAAAGACTCCAATATACATAGCTGCTGGAGACATATATGGGGGTGAGTCCCATATGGCTGAACTTTGTTCCCGTTATCCATTGTTGATGAGCAAGGAAAAGTTGGCCTCCATAGAAGAGCTTGAACCCTTTTTTAATCATGCATCCCAAATGGCTGCTCTTGACTATATTGTATCTATTGAAAGTGATGTATTTATACCTTCTTATTCCGGAAACATGGCAAAGGCTGTTGAGGGTCATCGCCGTTTTCTTAGACGTGGAAGAACAATATCTCCAGACAAGAAAGCCCTTGTTCGTCTGTTTGATAAACTGGATCAGGGAATAATGACTGAAGGGAAGAAACTATCAAATAGGATTATTGATCTCCACAGAAGACGACTTGGCTCCCCCAGGAAGAGAAAAGGGCCAATTTCTGGGACAAAGCACATGGAAAGGTTTCGATCAGAAGAAGCCTTTTATGCTAATCCCTTACCTAATTGTTTATGCCGGACAGAACCGCCACCTCTGAACATATCTTACATTGTTAAATAG 1578 0.4259 MQRRKWIPLVLLRKWLTAAICLITFVALFSVHVHIVPSSKDRRFNDKFPKPQDLQSWTRELAPPHLSKAPLPTPKLNGSRKGYSDYEKLWKPPSNRGFLTCTKATPNYTSPAESRGYLLVHTNGGLNQMRSGICDMVAVARIINATLVIPELDKRSFWQDTSNFSDIFDEEHFMNSLANDVKIIKKLPNKVVNATRVVKQFISWSGMDYYENEIASLWEDYQVIQASKSDSRLANNNLPPDIQKLRCRACYEALRFSPHIEQMGKLLVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSPDEAEELRMIRENTSYWKIKDIDPIEQRSKGLCPLTPKEVGIFLTALGYPSKTPIYIAAGDIYGGESHMAELCSRYPLLMSKEKLASIEELEPFFNHASQMAALDYIVSIESDVFIPSYSGNMAKAVEGHRRFLRRGRTISPDKKALVRLFDKLDQGIMTEGKKLSNRIIDLHRRRLGSPRKRKGPISGTKHMERFRSEEAFYANPLPNCLCRTEPPPLNISYIVK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0954 525 PIRSF UCP009360 1 514 IPR024709 -
Apr9g0954 525 PANTHER OS02G0726500 PROTEIN-RELATED 4 522 - -
Apr9g0954 525 Pfam GDP-fucose protein O-fucosyltransferase 117 432 IPR019378 -
Apr9g0954 525 CDD O-FucT_plant 117 438 IPR024709 -
Apr9g0954 525 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0954 Apr-Chr9 18277176 18286669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0954 16 515 Miscellaneous Gene Families AT1G22460 60.550 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0954 - - gmx:100795727 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0954 9 18277176 18286669 Apr9g0954 9 18277176 18286669 ECH
Apr9g0954 9 18277176 18286669 Apr1g0073 1 857468 862291 PCT