Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0073 ATGAACGCATCCACAGTCCGAGAGAGAAAAGGATCATCAATGCAGAGGCGTAGGACGGTTCCATTGAGCATGCTTAGGAGGTTCCTCGCTGCTGTTATATTCTCAATAGCTATCACTTCTCTCTTCTTTGTTCATGTCCATGTCTCTCCATCCCCCACTGATCACAAGTTCAATGACAAGATCCCTTCGTTTCACGACCCGCAAAGCTGGACTCAAGAGCTCGCTCCGCCCCATCTATCCATGGCTCCAATCTCTGTTTCCAAGTTGAATGATTCAAGATGGGATTTGGACTACGACAAACTGTGGAAGCCTCCACCAAATCATGGGTTTATACCCTGTACAAATCCTACTCCTAATTACACAACTCCTGCAAAGTCACGGGGTTACCTTTCGGTTCATACAAATGGTGGGCTAAACCAAATGCGTGCTGGGATATGTGATATGGTAGCTATAGCTCGTATCATAAATGCCACTCTTGTAATTCCAGAACTTGATAAAAACTCATTTTGGCATGATACTAGCAATTTTTCTGACATCTTTGATGAAGAGTGGTTTATTAGTTCTCTAGCTAATGATATAAAAATCATTAAGAAGCTTCCCAAAAAACATGTTAATGCTACCAGAATCGTCATGCAATTCAAAAGTTGGTCTGGTATGGATTACTATGAGAATGAGATTGCTGCCTTGTGGGATAATTTCAAAGTAATTCGAGCTTCCAAATCTGATTCTCGGTTAGCAAATAACAATCTACCTCCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTCCGTTTCTCTCCTCACATTGAAAAAATGGGAAAAATATTGGTGGAGAGGATGAGGTCATTTGGCCCTTATATTGCATTACATTTACGTTATGAGAAGGATATGCTTGCTTTTAGTGGGTGCACACATGAACTATCTACAGCCGAGTCTGAAGAGCTACGGATCATCAGAGAGAATACTACTTATTGGAAAAGAAAGTATATTAATCCCATAGAAGAGAGATCCAAAGGGTTTTGCCCTTTAACTCCGAAGGAAGTTGGAATTTTTCTTAATGCTCTTGGATACCCATCAAAGACTCCAATATATATTGCTGCTGGGGAGATATATGGGGGTGAGTCCCATATGAATGACCTGCGATCCCGCTATCCATTGTTATTGGGCAAGGAAAAGTTGGCATCCATTGAGGAGCTTGAACCCTTTTCTAATCATGCATCTCAAATGGCTGCTCTTGACTATATTGTATCTGTTGAAAGTGATGTATTTGTACATTCTTACCCTGGGAACATGGCAAAGGCTGTTGAAGGTCATCGTCGTTTTCTTGGGAGTGGAAGAACAATATCTCCAGATAGGAAAGCCCTTGTTCGTCTGTTTGATAAGCTGGCAAATGGATCAATGACTGAAGGGAAAACACTGTCCAGTAAAATTAATGATCTCCACAAAAGACGGCTTGGCTTCTTTAGGAAGAGAAAAGGACCCGTTTCTGGAACAAAGGGGTTGGACAGGTTTCGCTCAGAAGAAACATTCTATGCAAATCCTTTACCTGATTGTTTATGTCTGACAGAATCACTCTATAAACACCTCTCACGTTAG 1605 0.415 MNASTVRERKGSSMQRRRTVPLSMLRRFLAAVIFSIAITSLFFVHVHVSPSPTDHKFNDKIPSFHDPQSWTQELAPPHLSMAPISVSKLNDSRWDLDYDKLWKPPPNHGFIPCTNPTPNYTTPAKSRGYLSVHTNGGLNQMRAGICDMVAIARIINATLVIPELDKNSFWHDTSNFSDIFDEEWFISSLANDIKIIKKLPKKHVNATRIVMQFKSWSGMDYYENEIAALWDNFKVIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPHIEKMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHELSTAESEELRIIRENTTYWKRKYINPIEERSKGFCPLTPKEVGIFLNALGYPSKTPIYIAAGEIYGGESHMNDLRSRYPLLLGKEKLASIEELEPFSNHASQMAALDYIVSVESDVFVHSYPGNMAKAVEGHRRFLGSGRTISPDRKALVRLFDKLANGSMTEGKTLSSKINDLHKRRLGFFRKRKGPVSGTKGLDRFRSEETFYANPLPDCLCLTESLYKHLSR* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0073 534 PIRSF UCP009360 1 526 IPR024709 -
Apr1g0073 534 PANTHER OS02G0726500 PROTEIN-RELATED 12 529 - -
Apr1g0073 534 Pfam GDP-fucose protein O-fucosyltransferase 129 444 IPR019378 -
Apr1g0073 534 CDD O-FucT_plant 129 450 IPR024709 -
Apr1g0073 534 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 12 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0073 Apr-Chr1 857468 862291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0073 73 523 Miscellaneous Gene Families AT1G22460 68.514 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0073 - - gmx:100807411 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0073 1 857468 862291 Apr1g0073 1 857468 862291 ECH
Apr9g0954 9 18277176 18286669 Apr1g0073 1 857468 862291 PCT