Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0946 ATGGCTATCTCCTCAGCCTCTAACTCTCTCATTCCCACCAAATCATTAATCCCCCAAACCCACCCCCTCATTCCCTCCACCAACCTCAGGCCCAAGCCCAGGCCCACCCCTTCCATTCTCGCCGTCCATGCGGCCGAGCCCGCCAAAAACCCCGTCGTCTCCGACAAGCCCAAACCTTCAACTGAACCACAACCCCAACCGTCGATCGAAGCCCGCAGGGGTAAGTGGACCATTGACAGCTGGAAATTGAAGAAGGCCCTGCAGCTTCCGGAATACCCAAACCAGGAGGAGCTTGAGTCGGTGCTTCGGACCCTTGATGCTTTTCCTCCAATCGTCTTCGCCGGCGAGGCGAGGACATTGGAGGAACATCTCGGCGAAGCTGCCATGGGAAATGCCTTCCTTCTCCAAGGTGGAGACTGCGCCGAAAGCTTCAAAGAGTTCAATGCCAACAACATCCGTGACACCTTCCGAATTCTCCTTCAGATGAGCGTCGTCATGATGTTCGGTGGCCAAATGCCTGTCATAAAGGTGGGAAGAATGGCGGGCCAATTTGCGAAGCCGAGATCAGATCCGTTTGAGGAGAAGAACGGCGTTAAGCTTCCCAGTTACAGAGGGGATAACGTTAACGGTGATGCGTTTGAAGAGAAGTCAAGGATTCCGGATCCACAGAGAATGATTAGAGCTTATTGTCAAGCTGCAGCTACTCTCAATCTTCTGAGAGCTTTTGCCACTGGTGGTTATGCTGCTATGCAGAGGGTTACTCAGTGGAATTTGGACTTCACAGAACACAGTGAACAGGGAGATAGGTACCGAGAGCTTGCTAACCGGGTCGATGAGGCCCTTGGATTCATGGCTGCTGCAGGGCTCACTGTGGATCATCCCATAATGAAAACCACTGAATTCTGGACATCTCATGAATGCTTGTTATTGCCATATGAACAATCACTCACTAGGCTGGATTCAACTTCTGATCGCTACTATGACTGCTCAGCCCATATGCTTTGGGTTGGGGAACGAACCAGGCAGCTGGATGGTGCCCATGTTGAGTTTCTAAGAGGAGTTGCTAATCCCTTGGGAATTAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAAACTCATCGAGATCTTGAATCCCCAAAACAAACCAGGGAGAATAACTGTAATCACTAGGATGGGAGCTGAAAATATGAGAGTGAAGCTTCCACATCTAATCAGAGCAGTGCGTAGAGCTGGGCAAATTGTCACATGGGTCAGCGATCCTATGCATGGAAACACCATAAAGGCTCCATGTGGTCTCAAAACTCGTCCCTTCGATGCCATCAGGGCCGAAGTGAGAGCATTCTTTGATGTGCACGAGCAAGAAGGGAGCCACCCAGGAGGGGTTCATCTTGAGATGACGGGTCAAAATGTGACCGAGTGCATTGGTGGGTCAAGGACGGTCACATTTGATGACCTGAGCTCACGTTACCACACACATTGTGACCCAAGGCTCAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATTGCTGAAAGGCTAAGAAAGAGCAGGATCAGATCACAGCAGCCTCTAGGAGTGTAA 1587 0.5035 MAISSASNSLIPTKSLIPQTHPLIPSTNLRPKPRPTPSILAVHAAEPAKNPVVSDKPKPSTEPQPQPSIEARRGKWTIDSWKLKKALQLPEYPNQEELESVLRTLDAFPPIVFAGEARTLEEHLGEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFEEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSDRYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRIRSQQPLGV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0946 528 MobiDBLite consensus disorder prediction 17 72 - -
Apr9g0946 528 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 5 526 IPR002480 GO:0003849|GO:0009073
Apr9g0946 528 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 5 526 - -
Apr9g0946 528 Gene3D Aldolase class I 259 517 IPR013785 -
Apr9g0946 528 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 76 518 IPR002480 GO:0003849|GO:0009073
Apr9g0946 528 SUPERFAMILY Aldolase 65 516 - -
Apr9g0946 528 Pfam Class-II DAHP synthetase family 76 512 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0946 Apr-Chr9 18188192 18192387 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0946 K01626 - gmx:100797019 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0946 9 18188192 18192387 Apr9g0946 9 18188192 18192387 ECH
Apr9g0946 9 18188192 18192387 Apr1g0080 1 910176 913324 PCT