Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0080 ATGGCATTGGCCGTTCCCTCTTCCAACTCTCTCGTTCCCACCAAATCCATACTTCCATTCCATCGTTCCCTTCTTCATTCCCCCGACCAATGCTCCTTTCCCAGGCCCAAGCCCAAGCCCGTCCAAGCGGTTCACGCCGCCGACAACCCTGCTGTCTCGGACAAGCAGGCAAAGTGGGTCCTGGACAGCTGGAAGTCCAAAAAGGCCCTTCAACTCCCCCAATACCCCAACAAAGAGAACCTGGAATCGGTACTGAAGAGCCTCGAAGCCTTCCCTCCCATCGTGTTCGCGGGAGAGGCTAGGAACCTTGAGGAGCGTCTGGGCGAAGCCGCCATGGGAAACGCTTTCCTTCTTCAGGGTGGAGACTGCGCCGAGAGCTTCAAGGAGTTCCACACCAACAACATTCGTGACACCTTCAGAATCCTTCTCCAGATGAGCGTCGTTATGATGTTTGGAGGCCAAATGCCCGTCATTAAGGTTGGACGAATGGCGGGTCAATTCGCGAAACCGCGATCGGAAGCGTTGGAGGAGAAGAACGGGGTGAAGCTGCCGAGTTACAGAGGAGATAACGTGAACGGAGATGCGTTTGAGGAGAAGGCGAGAATTCCAGATCCTCAAAGAATGATTAGAGCGTACAGTCAATCGGCGGCGACACTGAATCTTCTGAGGGCCTTTGCGACGGGTGGGTATGCTGCTATGCAAAGAGTTACTCAATGGAATTTGGACTTCACGCAGCATAGCGAGCAGGGAGACAGGTACCTAGAGCTTGCTCACCGAGTTGATGAGGCCCTTGGATTCATGGCTGCTGCTGGCCTCACTGTGGACCATCCTATAATGAGAACAACTGAGTTCTGGACTTCGCATGAATGTCTTTTATTGCCATACGAACAATCACTGACTAGGTTGGATTCAACTTCTGGTCTTTACTATGACTGCTCCGCCCATATGCTTTGGGTTGGGGAACGGACCAGGCAGCTCGATGGCGCCCATGTTGAGTTTCTAAGAGGTGTTGCTAATCCCCTTGGAATTAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAGACTGATCGAGATCTTGAATCCCCACAACAAACCAGGGAGAATAACTGTGATTACCAGGATGGGAGCTGAAAATACGAGAGTAAAGCTTCCACATCTGATCGGGGCAGTACGCAGAGCGGGACAAATTGTAACTTGGGTCAGTGATCCCATGCATGGAAACACCATAAAGGCTCCGTGCGGACTCAAAACTCGCCCCTTCGATGCCATCAGGGCGGAGTTAAGAGCATTTTTCGACGTGCACGAACAAGAAGGAAGCCACGCAGGTGGGGTTCATCTAGAGATGACGGGTCAGAATGTGACTGAGTGCATTGGTGGGTCAAGGACGGTCACGTTTGACGATCTGAGCTCCCGTTACCACACACACTGTGACCCTAGGCTTAATGCTTCACAATCTCTGGAACTTGCTTTCATCATATCTGAACGCCTCAGAAGGAGTAGGATCATCTCCGAGAAGCATCTTTCCTCCATAGCACTGTAA 1545 0.5152 MALAVPSSNSLVPTKSILPFHRSLLHSPDQCSFPRPKPKPVQAVHAADNPAVSDKQAKWVLDSWKSKKALQLPQYPNKENLESVLKSLEAFPPIVFAGEARNLEERLGEAAMGNAFLLQGGDCAESFKEFHTNNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEALEEKNGVKLPSYRGDNVNGDAFEEKARIPDPQRMIRAYSQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQHSEQGDRYLELAHRVDEALGFMAAAGLTVDHPIMRTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVRLIEILNPHNKPGRITVITRMGAENTRVKLPHLIGAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAELRAFFDVHEQEGSHAGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIISERLRRSRIISEKHLSSIAL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0080 514 Pfam Class-II DAHP synthetase family 59 495 IPR002480 GO:0003849|GO:0009073
Apr1g0080 514 Gene3D Aldolase class I 92 258 IPR013785 -
Apr1g0080 514 Gene3D Aldolase class I 259 500 IPR013785 -
Apr1g0080 514 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 2, CHLOROPLASTIC 35 513 - -
Apr1g0080 514 SUPERFAMILY Aldolase 53 499 - -
Apr1g0080 514 TIGRFAM DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 59 501 IPR002480 GO:0003849|GO:0009073
Apr1g0080 514 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 35 513 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0080 Apr-Chr1 910176 913324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0080 K01626 - gmx:100797019 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0080 1 910176 913324 Apr1g0080 1 910176 913324 ECH
Apr9g0946 9 18188192 18192387 Apr1g0080 1 910176 913324 PCT