Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0937 ATGGCTATGGTTAGGTGCTTCTCTCTTTTACATGTAAGGAAGGAGAAAAACAAGTCTCAATGTTGCATGTTTCTTCAGGGGAATGAGAAGTCTTCAAAAAAGGACTTCAACATTCTACTTGCCAAACTACAAGCTTCAAGATTATCATCAGCGACACGTGATTTAGATTCAAGCACTTTTGATGTTGCAGTAGGCAATGGTATCCAGGAAAATCAAAGGCTCAATGCAAAGGTTGTGAGTCTTGAGAGTCCTGTGAAGACTGAAGTAGAGGAAGCTTATAAAGGGAAAGATGAGAAAGACGATTTGCCTTTGATCAAGAGGGAACTCTCTGATTTTGATCTCCAATGCCATGAAGCTGTTGCAAGCAAAGAAAGATATGATGCAACAGATAAAAAGGTAAAGTATCCCAATTTGTGTGGAACCCAAGCCAACAATGAATTGGAAGACAAAAGTGATAGATACAGCCAAAAGAGTGTTGAGACAACCCAGAGTGGACATGTCAGTGATCCTGGGATTGGCAAGGCTGATTTCTGGGCCTCTCCAAAGCTCAAGAGATACTGCTCTGATCTAGCAAAAATGAATTTGCCTAAACAGATAACTTATCACTTTCTTCCTTCAAAGTCACAGTCTTTTGAGGATTTTAAGGGTTTTTCAGCAATGGATAATCTTGAAAGCTCCATGTCTGTAATGAGTCACTACAGTGCTGATAAAGTGGTTTTGAGAAGGCATTCTTTAAGTCGATTACTCCCTTCAGGAAGTAAAAATTTGTGGTGGAAGATGATCCTTTGGAGTCACAGGAATATACATAGAACACTCTCTAGCAAATCAACACTAGTTCCTGCTGCTAGTCCTGCCTTAATTAGTCAATGTGGGTACTCTTCAGACACTCTTGAACCAAAACAAGGCAAGGAATTGAGATATGTGAAATCTTCTGAATCAATTACAATAGAATCCTTTAACAAAAGCAGCGTTAGCAAAAATATTGATACGCAAAGGGGGAGCGAGGTTCAAAATGAAAATTCTGGTTTCTGTCCCCAAAACCAATTGATTGCTTTCTCAACAGACTCATCCTCTTTTGCCAGAGTGGATGCATGGGTGAAAAATCTTGAAATTCAGCAACCACTTCCTGAAGATGATTTTGATGATGGCAATGCCAGAAGCATTGTCTTTCCACCTTCTCCTGATGCCCGTAGATCAATGACAAGAACCAGATCTCAGTTGACTAATCAAGATGCCAATCTTTCAAAGGATATTTTGAATGCAAATAGTGTAGTCCAGGCTCTGAATCCAGCTTCAACTATTGCTCACATATCAAGTATTGGTATAAAAACCATCCCTGCAATTTCACACTTATCCAATCTACGCTCTGTCAACTTGTCAAACAATGTCATAGTTCACATATCCACAGGATTTCTTCCAAAGGGTATCCAAACACTTAATGTGTCAAGAAACAAGATCAGCACCCTTGAGGGTCTCAGAGAATTGACCCGGCTGCGAGTACTAGACCTAAGTTACAATCGCATCTCAAGAATTGGACAAGGGTTGTCAAGTTGTACACTCATCAAAGAGCTATATCTTGTGGGGAACAAAATAAGTGATGTTGAGGGGCTACACAGGCTATTGAAGCTAACAGTTCTAGACCTGAGCTTCAACAAGATCACAACAACAAAAGCATTAGGCCAGCTTGTGGCTAATTATAACTCACTTCAGGCCCTTAATCTACTTGGAAATCCCATTCAAAGCAACATCAGTGATGACCAGCTAAGCAAAGCAGTTTGTGGCCTTCTTCCAAAACTGGTGTACCTGAATAAGCAACCTCTTAAGGCTCAGAGGGTGCGTGAAATATTCAGCGATAGTGTTGCCCGAGCCGCCCTTGGCAACGGCAAGTGGAGCTCGGAGAGAAGGTCATTAAGAAGAGTTGGCCATGGAGGATCAAGTTTGTCCAGAGGGTCTAAAAGAAGTGCAAGTGTTTCCCAGAAAATTGTGAACCGGACAAGGAAGTGA 2004 0.4117 MAMVRCFSLLHVRKEKNKSQCCMFLQGNEKSSKKDFNILLAKLQASRLSSATRDLDSSTFDVAVGNGIQENQRLNAKVVSLESPVKTEVEEAYKGKDEKDDLPLIKRELSDFDLQCHEAVASKERYDATDKKVKYPNLCGTQANNELEDKSDRYSQKSVETTQSGHVSDPGIGKADFWASPKLKRYCSDLAKMNLPKQITYHFLPSKSQSFEDFKGFSAMDNLESSMSVMSHYSADKVVLRRHSLSRLLPSGSKNLWWKMILWSHRNIHRTLSSKSTLVPAASPALISQCGYSSDTLEPKQGKELRYVKSSESITIESFNKSSVSKNIDTQRGSEVQNENSGFCPQNQLIAFSTDSSSFARVDAWVKNLEIQQPLPEDDFDDGNARSIVFPPSPDARRSMTRTRSQLTNQDANLSKDILNANSVVQALNPASTIAHISSIGIKTIPAISHLSNLRSVNLSNNVIVHISTGFLPKGIQTLNVSRNKISTLEGLRELTRLRVLDLSYNRISRIGQGLSSCTLIKELYLVGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQALNLLGNPIQSNISDDQLSKAVCGLLPKLVYLNKQPLKAQRVREIFSDSVARAALGNGKWSSERRSLRRVGHGGSSLSRGSKRSASVSQKIVNRTRK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0937 667 Gene3D Ribonuclease Inhibitor 514 612 IPR032675 -
Apr9g0937 667 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 4 666 - -
Apr9g0937 667 PANTHER NISCHARIN RELATED 4 666 - -
Apr9g0937 667 SUPERFAMILY Outer arm dynein light chain 1 438 606 - -
Apr9g0937 667 Gene3D Ribonuclease Inhibitor 401 513 IPR032675 -
Apr9g0937 667 Pfam Leucine Rich repeat 542 554 IPR001611 GO:0005515
Apr9g0937 667 ProSiteProfiles Leucine-rich repeat profile. 475 496 IPR001611 GO:0005515
Apr9g0937 667 MobiDBLite consensus disorder prediction 647 667 - -
Apr9g0937 667 Pfam Leucine rich repeat 452 508 IPR001611 GO:0005515
Apr9g0937 667 MobiDBLite consensus disorder prediction 144 168 - -
Apr9g0937 667 MobiDBLite consensus disorder prediction 635 667 - -
Apr9g0937 667 ProSiteProfiles Leucine-rich repeat profile. 542 563 IPR001611 GO:0005515
Apr9g0937 667 ProSiteProfiles Leucine-rich repeat profile. 520 541 IPR001611 GO:0005515
Apr9g0937 667 ProSiteProfiles Leucine-rich repeat profile. 497 519 IPR001611 GO:0005515
Apr9g0937 667 SMART LRR_typ_2 540 562 IPR003591 -
Apr9g0937 667 SMART LRR_typ_2 451 473 IPR003591 -
Apr9g0937 667 SMART LRR_typ_2 495 518 IPR003591 -
Apr9g0937 667 SMART LRR_sd22_2 473 494 - -
Apr9g0937 667 SMART LRR_sd22_2 518 539 - -
Apr9g0937 667 SMART LRR_sd22_2 540 561 - -
Apr9g0937 667 SMART LRR_sd22_2 495 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0937 Apr-Chr9 18011995 18015445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0937 475 584 Receptor kinase-like Gene Family AT4G39400 35.043 6.01e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0937 - - gmx:100801034 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0937 9 18011995 18015445 Apr9g0937 9 18011995 18015445 ECH
Apr9g0937 9 18011995 18015445 Apr1g0089 1 988490 992324 PCT