Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0917 ATGAATCTCTTTTCCATCATCTCTTTTCTTCTGCTCACTCGCCACCAACTCGTTCACGCCGAGTCGACTCAGCCTCCTTATGGCTGCGATTCCTCCTCCTCTAACTACGCATTCTGCAATCCCAACCTTCCCATCAGCCAGAGAGCCAAAGACCTCGTGTCACGACTCACACTGGACGAGAAACTCGCCCAACTCGTCAACTCGGCTCCTCCGATTCGGCGACTCGGCATTCCGAGTTACGAGTGGTGGAACGAAGCCTTGCACGGCGTTGCGGACGCTGGGCTTGGCATACGACTGAATGGCACTATCAAATCTGCAACTTCCTTCCCTCAAGTCATTCTCACAGCTTCTTCCTTCGACCAAAACCTTTGGTACCAAATCAGTCAGGCGATTGGAAAGGAAGCAAGAGCAGTGTATAATGAGGGGCAAGCTATGGGATTGACGTTTTGGGCTCCGAACATAAACATATTCAGAGATCCAAGGTGGGGGAGAGGGCAAGAGACGGCAGGGGAAGACCCTTTGGTGAGTGCCAAATATGCTGTGGCTTATGTGAGAGGCCTTCAAGGGGATTCTTTTGAGGGAGGGAATCTAGGTCAGCATCTTCAAGCTTCAGCTTGTTGCAAGCACTTTACTGCCTATGATTTGGACCAATGGAAGGGCCTCGATCGCTTTGTCTTCAATGCTCGTGTCACTTTGCAAGATTTGGCCGACACCTATCAGCCACCATTTCAGAGTTGTATACAGAAAGGTCGAGCCAGTGGGATAATGTGTGCTTATAACCGTGTCAATGGGGTTCCAAACTGTGCAGATTTCAATCTACTAACCAACATTGCAAGAAAGCAATGGAATTTCGATGGGTATATTACTTCGGATTGTGGAGCAGTCTCTATCATACACGATAGGCAAGGTTATGCAAAAACAGCAGAGGACGCTATAGCCGATGTGTATAGGGCTGGGATGGATGTGGAGTGTGGTAATTACATGACTATGCATGCTAAATCAGCAGTGTTGCAAAAGAAATTGCCCATTTCTCAAATCGACCGTGCCCTTCAAAATCTATTCTCTATGAGAATAAGGCTAGGCCTATTTGATGGAAACCCCTCCAAGCTCGCATTTGGCACCATTGGTCCCAATCAAGTATGTTCCAAACAACACCTTCAACTAGCTCTTGAAGCTGCAAGAGATGGCATTGTCCTATTGAAGAACACTGCCTCACTTCTTCCACTGCGAAAATCAAACCCAAGTGTTTCCCTTGCAGTGATAGGCCCCAATGCCAATGCTTCATCATTAGCTGTTCTAGGGAACTATTATGGTCGTCCTTGTAAACTGGTGACACTATTGCAAGGCTTTCAGGACTATGCCAAGAACACAATTTATCATCCTGGGTGTAATGATGGCCCGCAATGTGCTTCTGCTGAAATAGAAGAGGCAGTGGAAGTGGCTAAAAAGGTGGATTATGTGGTGCTTGTCATGGGATTGGATCAAAGTCAAGAGAGGGAATCACATGATCGTGAGTACCTAGACTTGCCAGGGAAGCAACAACAACTTATCAATAGTGTTGCCAAAGCTTCTAAGCGACCAGTTATTTTGGTAGTCATGTGTGGAGGCCCATTAGATATCACTTCAGCCAAGTCTGACAACAAAATTGGAGCCATCTTGTGGGCTGGTTATCCAGGGGAACTTGGAGGAGTGGCCCTGGCCCAGATTATCTTTGGTGACCATAACCCAGGAGGAAGATTACCAATTACTTGGTACCCAAAAGATTTCATCGATGTACCAATGACAGACATGAGGATGAGACCTGATCCAGCATCAGGATATCCTGGGAGAACCTACAGATTTTACACCGGTCCAAAGGTGTATGAATTTGGCTATGGCCTAAGCTACACAAAATATTCCTATGAGTTCATTTCTGTTTCACAAAACAACCTTCACATCAACCAATCATCCAATCATTTTATGATTCAAAATTCTGAAACCATCCGTTATAAGCTAGTTTCAGAGTTGGGTAAAGAAACATGCCAAAGCATGTCAGTGTCAGTGACTTTGGGAGTGAAAAATAATGGTAACATGATGGGGAAGCATCCAGTGTTGCTATTTATGAGGCAAGGTAAACAGAGAAACGGAAACCCAATGAAACAATTGGTGGGTTTTCAAAGTGTGAAGCTAGATGCAGGAGAAAGGGCTCATGTGGGATTTGAGCTAAGCCCTTGTGAACATCTTAGCATAGCAAATGAGGCTGGTTCAATGGTGATAGAAGAAGGATCTTATTTATTGCTTGTGGGTGACCAAAAGTACCAAATAAATGTCACTGTTTGA 2319 0.4545 MNLFSIISFLLLTRHQLVHAESTQPPYGCDSSSSNYAFCNPNLPISQRAKDLVSRLTLDEKLAQLVNSAPPIRRLGIPSYEWWNEALHGVADAGLGIRLNGTIKSATSFPQVILTASSFDQNLWYQISQAIGKEARAVYNEGQAMGLTFWAPNINIFRDPRWGRGQETAGEDPLVSAKYAVAYVRGLQGDSFEGGNLGQHLQASACCKHFTAYDLDQWKGLDRFVFNARVTLQDLADTYQPPFQSCIQKGRASGIMCAYNRVNGVPNCADFNLLTNIARKQWNFDGYITSDCGAVSIIHDRQGYAKTAEDAIADVYRAGMDVECGNYMTMHAKSAVLQKKLPISQIDRALQNLFSMRIRLGLFDGNPSKLAFGTIGPNQVCSKQHLQLALEAARDGIVLLKNTASLLPLRKSNPSVSLAVIGPNANASSLAVLGNYYGRPCKLVTLLQGFQDYAKNTIYHPGCNDGPQCASAEIEEAVEVAKKVDYVVLVMGLDQSQERESHDREYLDLPGKQQQLINSVAKASKRPVILVVMCGGPLDITSAKSDNKIGAILWAGYPGELGGVALAQIIFGDHNPGGRLPITWYPKDFIDVPMTDMRMRPDPASGYPGRTYRFYTGPKVYEFGYGLSYTKYSYEFISVSQNNLHINQSSNHFMIQNSETIRYKLVSELGKETCQSMSVSVTLGVKNNGNMMGKHPVLLFMRQGKQRNGNPMKQLVGFQSVKLDAGERAHVGFELSPCEHLSIANEAGSMVIEEGSYLLLVGDQKYQINVTV* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0917 772 Gene3D - 382 629 IPR036881 GO:0004553|GO:0005975
Apr9g0917 772 PANTHER GLYCOSIDE HYDROLASE FAMILY 3 PROTEIN 5 771 - -
Apr9g0917 772 Pfam Glycosyl hydrolase family 3 C-terminal domain 397 629 IPR002772 GO:0004553|GO:0005975
Apr9g0917 772 PANTHER SUGAR HYDROLASE-RELATED 5 771 IPR044993 GO:0009044|GO:0045493
Apr9g0917 772 PRINTS Glycosyl hydrolase family 3 signature 109 128 IPR001764 GO:0004553|GO:0005975
Apr9g0917 772 PRINTS Glycosyl hydrolase family 3 signature 203 219 IPR001764 GO:0004553|GO:0005975
Apr9g0917 772 PRINTS Glycosyl hydrolase family 3 signature 277 295 IPR001764 GO:0004553|GO:0005975
Apr9g0917 772 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 397 632 IPR036881 GO:0004553|GO:0005975
Apr9g0917 772 Pfam Glycosyl hydrolase family 3 N terminal domain 102 353 IPR001764 GO:0004553|GO:0005975
Apr9g0917 772 Gene3D - 48 371 IPR036962 GO:0004553|GO:0005975
Apr9g0917 772 SUPERFAMILY (Trans)glycosidases 36 396 IPR017853 -
Apr9g0917 772 Pfam Fibronectin type III-like domain 697 764 IPR026891 -
Apr9g0917 772 Gene3D Immunoglobulins 630 772 IPR013783 -
Apr9g0917 772 SMART Fn3_like_2 695 765 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0917 Apr-Chr9 17611564 17618023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0917 17 772 Glycoside Hydrolase AT1G78060 63.696 0.0 1005
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0917 - - gmx:100780688 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0917 9 17611564 17618023 Apr9g0917 9 17611564 17618023 ECH
Apr9g0917 9 17611564 17618023 Apr1g0112 1 1246784 1255581 PCT