Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0914 ATGGCTGCTGGAATATCTTACCAGGCTAATGGGGCTTTTCAATCCCATTCTTATTTGAACAATTTTAATCATCAGAAAAAGCTGAAGAACAATATAGTAAAACTGGTGACCAAGGATTTTATCAGCAGTAACTGCCTTTCAAGGCGGGTTTGTAGTGTAATTCAATCTTCAGCTTCTCAAACATCAGTGATTGAGACAGTGTCATCCCCTTCAAGAAGCAAAACTAGGGACAGAGACATTCACAAGAAATCAAATGAAGCTGCTTTGATCCTTATTCGACACGGTGAGTCCTTGTGGAATGAGAAGAACTTGTTCACAGGTTGTGTTGATGTGCCACTGAGCAAGAAGGGCATAGATGAAGCAATTGAAGCTGGGAAAAGAATTAGCAGTATTCCTGTCGATCTCATATTTACATCTGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACACATCATCGTCGTAAGAAGGTGCCTATCATAATGCACAATGAGAGTGAACAAGCAAGGGAATGGAGTCAAGTTTTTAGTGAAGATACAAAACGGCAATCCATTCCAGTCATAGCAGCCTGGCAATTGAATGAAAGAATGTATGGAGAACTACAAGGTCTCAATAAGCAAGAAACGGCAGACAAATATGGGAAAGAACAAGTCCATGAGTGGCGCCGGAGTTATGACATACCTCCCCCAAATGGTGAAAGTTTGGAAATGTGTGCTCAAAGGGCAGTTGCCTATTTTAGAGACCAAATTGAACCTCAACTTTTATCAGGAAAGAATGTTATGATTGCAGCCCATGGGAATTCTCTGAGATCCATTATCATGTACCTTGACAAACTAACTTCCCAACAGGTGATTAGTTTAGAATTGTCAACTGGAATTCCTATGCTTTATATTTTCAAAGAAGGAAGATTCGTTAGGAGGGGAAGTCCAATAGGACCAACTGAAGCTGGAGTTTATGCCTATACTGGGGGTTTGGCCCTTTACAGGCAGAAGTTGGATGATAGGTTCCAATAA 1020 0.4098 MAAGISYQANGAFQSHSYLNNFNHQKKLKNNIVKLVTKDFISSNCLSRRVCSVIQSSASQTSVIETVSSPSRSKTRDRDIHKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTHHRRKKVPIIMHNESEQAREWSQVFSEDTKRQSIPVIAAWQLNERMYGELQGLNKQETADKYGKEQVHEWRRSYDIPPPNGESLEMCAQRAVAYFRDQIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQQVISLELSTGIPMLYIFKEGRFVRRGSPIGPTEAGVYAYTGGLALYRQKLDDRFQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0914 339 SUPERFAMILY Phosphoglycerate mutase-like 89 305 IPR029033 -
Apr9g0914 339 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 86 313 IPR005952 GO:0004619|GO:0006096|GO:0016868
Apr9g0914 339 Pfam Histidine phosphatase superfamily (branch 1) 184 292 IPR013078 -
Apr9g0914 339 Pfam Histidine phosphatase superfamily (branch 1) 89 162 IPR013078 -
Apr9g0914 339 Gene3D - 78 311 IPR029033 -
Apr9g0914 339 PANTHER PHOSPHOGLYCERATE MUTASE 2 336 IPR005952 GO:0004619|GO:0006096|GO:0016868
Apr9g0914 339 CDD HP_PGM_like 89 308 IPR013078 -
Apr9g0914 339 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 2 336 - -
Apr9g0914 339 SMART PGAM_5 88 274 IPR013078 -
Apr9g0914 339 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 91 100 IPR001345 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0914 Apr-Chr9 17584800 17588253 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0914 K01834 - gmx:100784422 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0914 9 17584800 17588253 Apr9g0914 9 17584800 17588253 ECH
Apr9g0914 9 17584800 17588253 Apr1g0114 1 1265615 1269394 PCT