Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0114 ATGGCTGCTGAAGTATATCACCGGAGTATTGGCACTTTGCAGTCCTGTTCTTATTTGAATAAGTCTAATCATCACCAAAAGCTTAGCAAAACTTCAGTAAGATTGGTGGCAAAGGATTTTATCAGTAGTAATGGCTTGTCAAGGAGAGAAAGTAATCACTCTGGCCAGAGGAATTGTAGTGTAAGTCAATCTTCAGCTTCCCAAACATCAGTGGTTGATCCAGTGTCATCCCCTTCAAGAAGAAACACCGGAGACACTTACAAGAAATCAAATGAAGCATCTTTGATCCTTATTCGACATGGTGAGTCGTTATGGAATGAAAAGAATTTATTCACGGGTTGTGTTGATGTCCCGCTAAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGAAAAAGAATTAGCAGCATTCCTGTTGATGTCATATTTACATCTGCTTTGATTCGTGCACAAATGACAGCTATGCTTGCCATGACCCAACATCGTCGTAGAAAGGTCCCTATCATTATGCACGATGAGAGTCAACAGGCAAGGTCATGGAGTCAAGTTTATAGTGAAGACACAAAAAAGCAGTCCATTCCTGTCATATCAGCTTGGCAACTAAATGAAAGAATGTATGGAGAACTACAAGGCCTCAATAAGCAAGAAACAGCAGACAGATATGGGAAAGAACAAGTCCATGAGTGGCGACGGAGTTATGACATTCCTCCTCCAAATGGTGAAAGTTTGGAAATGTGTGCTCAAAGAGCGGTTGCCTATTTCAAAGACCAAATTGAACCTCAACTTTTATCAGGAAAGAATGTTATGATTGCAGCCCATGGTAATTCATTGAGATCCATTATCATGTATCTCGACAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTATCAACTGGAATTCCCATGCTTTATATTTTCAAAGAGGGAAGATTCATTAGGAGGGGTAGTCCCATAGGACCTTCTGAAGCTGGAGTTTATGCCTATACTAAGCGTTTAGCTCTTTACAGGCAGAAATTGGATGAGATGTTCCAATGA 1038 0.4046 MAAEVYHRSIGTLQSCSYLNKSNHHQKLSKTSVRLVAKDFISSNGLSRRESNHSGQRNCSVSQSSASQTSVVDPVSSPSRRNTGDTYKKSNEASLILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPIIMHDESQQARSWSQVYSEDTKKQSIPVISAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAQRAVAYFKDQIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPSEAGVYAYTKRLALYRQKLDEMFQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0114 345 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 92 319 IPR005952 GO:0004619|GO:0006096|GO:0016868
Apr1g0114 345 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 97 106 IPR001345 GO:0003824
Apr1g0114 345 SMART PGAM_5 94 280 IPR013078 -
Apr1g0114 345 Pfam Histidine phosphatase superfamily (branch 1) 190 298 IPR013078 -
Apr1g0114 345 Pfam Histidine phosphatase superfamily (branch 1) 95 171 IPR013078 -
Apr1g0114 345 PANTHER PHOSPHOGLYCERATE MUTASE 1 344 IPR005952 GO:0004619|GO:0006096|GO:0016868
Apr1g0114 345 CDD HP_PGM_like 95 314 IPR013078 -
Apr1g0114 345 MobiDBLite consensus disorder prediction 45 87 - -
Apr1g0114 345 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 1 344 - -
Apr1g0114 345 SUPERFAMILY Phosphoglycerate mutase-like 95 311 IPR029033 -
Apr1g0114 345 Gene3D - 85 318 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0114 Apr-Chr1 1265615 1269394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0114 K01834 - gmx:100802621 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0114 1 1265615 1269394 Apr1g0114 1 1265615 1269394 ECH
Apr9g0914 9 17584800 17588253 Apr1g0114 1 1265615 1269394 PCT