Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0897 ATGGAAGAGGACAAGTTGGTGGGGACCAATGAGGCAAATCCCCGAGCGATTGTGAAGTTAGAAAAATATGCTTTTGTTATTCAAAATGAAAATAGGAAAAATGAATTGAAGGGCATAGAAACTCAAAATAATGGTAATGATTGCCCCGAGTTTGAAAATGAACAGTATGATATATCAGACAAGGTAAGTGATCAAGTTGCTGAAAAGTTGGAAGGAGATACTTTTAGTAGTCAAAATAACGATAAGGAATTGAAAAAGGCAAAAAATCAAAATTTTGGTCATGATTTCCAAGAGCTTGACAGCAAGCAAGATGATATATTAGACAAGATAAACAAGGTTATAGACATAAAGCTGAGTATTCATGAGGAAATAAAAAATAATGTGATGGAAGAATCTGAGTTGGCTCAGAGGGTAGCTAGTAGTTATGATTTACAAAATGGATGTCAACAAGAAAACTTAGAAGAAAATGTTAAAGTTCAAGGTGACTTGTTTCAAAAGGTGCAGGAGAGTGATTACATAAAATCTGAAAATCAAATTAATATTATTGGACAAGAGTATGTAGATGTTATGGTAGAGAACAATGGAAATTTTGAGCCTAAAAGTTCAGAAGTAAATCTAGATAATAATTTTGGACACAATGACTTGGCTAAAGAGAAGGATGACAGCGGAAGCATGGAATCAACACAAATAGATCAGAAGAGAAACAACATTTCAAACGAGGACAATAATTTGCAGCTTGTATTTGATGAAATTGAGGTTCCTGGGGTTGAAGTTAGCAGTCACAAATCTACCCATACTTTGGATGCAAATCTAGAGACTTCCTCTGTTGTTGAGAAGACAATATCTCTAAAAAACTTTGTTAGGGACAAAAGTATAGTAGTAATTTCCACTATGTTGCGTCGTCTTTCTAGAAAAAGAGATGAAAATGTTGTGGGTAATTTTGATGAAGTGGGTCAAGATGTTTCAAATTCATCAAGAGATAATGAAACTAAAGAGGCTTCTGAGAAGGTAATGGAGAAAATAACTTGGAACCCTTTGAATAATATTAAAACGTCACCTAATGTTGACGCAGAAAATAAAATTGAGCAAAAAGTGGAATCCATAACTGAGGGTCCACCAATGCCCATACCCATGAAAGGAAGGATTATTGTGTACACAAGACTAGGGTGTCAAGAATATAAAGAAGTTAGAAAATTTTTGTATATGAGAAGACTTAGATATGTTGAAATCAACATTGATGTGTACCCCAGTAGAAAGATAGAGCTAGAGAAGAATTCTAGATCTACTTCTGTTCCTAAGATATATTTTAATGAAATACTTATCGGAGGCTTGAGAGAACTAAAGAGTTCAAATGAGTCTGGCAAGCTTGAGGAGAAGATTGAGTACATTATTAATGAAGCATCGCCATTTGAAGGTCCATTGCCACCACTTTCTGGAGAGGATGATATGTCCAGTTGTGGAGCACTTGATGAAATGGCTATAATTGTTCGCAAAATGAAAGAATACATTGTTGTGAAGGATCGATTCTACAAAATGCGAAGGTTTGCTCGTTGCTTTCTTGGCTTTGAAGCTGTGGACTTCTTGTCCGAAGATCAATATTTGGAAAGAAGAGAGGCTATTGAGTTTGCACGAAAGCTTGCTAGCAAACTTTTCTTTCAACATGTTCTTAATGAAAATCTATTTGAGGATGGAAATCACCTATATCGATTTTTGGATGATGATCCAATTGTTGCAACTGAGTGTCATAATATTCCAAGGGGGATAACTACTATAAAACCTAAGTCTATGGTAGAAGTTGCATCTAGGCTAAGGCTTTTGTCCTATGCAATGTTTGAAGCGTATGCCTCTGAAGATGGATGTCATGTTGATTATAGAAGCATGCATGGAAGTGAGGAGTTTGCCAGGTATCTAAGAACAGTAGAAGAGCTTCAAAGAGGGGAAATATGGAATTTGTCAAGAGAAGAGAAACTTTCTTTCTTTATTAATTTGTATAATATGATGACCATCCACGCAATTTTAGTATGGGGTCATCCAACTGGAGCATTAGAAAGAAGAAAATTGTATGGAGACTTCAAATATGTTATTGGTGGATCCACCTACTCACTTTTGGCTATCCAGAATGGCATTTTGAGAGGAAATCAACGACCACCATATACCTTTATGAAATTGTTTGGTGTAAATGATAAACGTTTAAAGGTGGCCCTCCCTTTTCCTGAGCCTCTTATTCATTTTGCTTTAGTATACGGTTCTAGATCTGGACCAGCACTTCGGTGCTATTCACCTGGGGACATTGACAAAGAATTAGTGGATGCAGCCCGTGATTTCTTAAGAAATGGAGGCCTTTTAATAGATTTTACTGCAAAGGTTGCATATGCCAGTAAGATCCTTAAATGGTTTAGTGTAGATTTTGGCAAGAATGAGATAGAGGTTTTGAAGCATGTGTCAAACTACTTACATCCAGCTGACTCAGAATTATTATTGGACCTTCTTGCAACTTCTGAGTTGAAGGTGATATATCAAACTTATGATTGGGGTTTGAATTGCTAA 2547 0.3596 MEEDKLVGTNEANPRAIVKLEKYAFVIQNENRKNELKGIETQNNGNDCPEFENEQYDISDKVSDQVAEKLEGDTFSSQNNDKELKKAKNQNFGHDFQELDSKQDDILDKINKVIDIKLSIHEEIKNNVMEESELAQRVASSYDLQNGCQQENLEENVKVQGDLFQKVQESDYIKSENQINIIGQEYVDVMVENNGNFEPKSSEVNLDNNFGHNDLAKEKDDSGSMESTQIDQKRNNISNEDNNLQLVFDEIEVPGVEVSSHKSTHTLDANLETSSVVEKTISLKNFVRDKSIVVISTMLRRLSRKRDENVVGNFDEVGQDVSNSSRDNETKEASEKVMEKITWNPLNNIKTSPNVDAENKIEQKVESITEGPPMPIPMKGRIIVYTRLGCQEYKEVRKFLYMRRLRYVEINIDVYPSRKIELEKNSRSTSVPKIYFNEILIGGLRELKSSNESGKLEEKIEYIINEASPFEGPLPPLSGEDDMSSCGALDEMAIIVRKMKEYIVVKDRFYKMRRFARCFLGFEAVDFLSEDQYLERREAIEFARKLASKLFFQHVLNENLFEDGNHLYRFLDDDPIVATECHNIPRGITTIKPKSMVEVASRLRLLSYAMFEAYASEDGCHVDYRSMHGSEEFARYLRTVEELQRGEIWNLSREEKLSFFINLYNMMTIHAILVWGHPTGALERRKLYGDFKYVIGGSTYSLLAIQNGILRGNQRPPYTFMKLFGVNDKRLKVALPFPEPLIHFALVYGSRSGPALRCYSPGDIDKELVDAARDFLRNGGLLIDFTAKVAYASKILKWFSVDFGKNEIEVLKHVSNYLHPADSELLLDLLATSELKVIYQTYDWGLNC* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0897 848 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 504 570 IPR000591 GO:0035556
Apr9g0897 848 ProSiteProfiles Glutaredoxin domain profile. 370 467 - -
Apr9g0897 848 MobiDBLite consensus disorder prediction 212 227 - -
Apr9g0897 848 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 59 847 - -
Apr9g0897 848 Gene3D Glutaredoxin 378 463 - -
Apr9g0897 848 MobiDBLite consensus disorder prediction 198 238 - -
Apr9g0897 848 CDD DEP 491 569 - -
Apr9g0897 848 Pfam Protein of unknown function, DUF547 650 776 IPR006869 -
Apr9g0897 848 ProSiteProfiles DEP domain profile. 499 572 IPR000591 GO:0035556
Apr9g0897 848 SUPERFAMILY Thioredoxin-like 379 461 IPR036249 -
Apr9g0897 848 SMART DEP_3 499 572 IPR000591 GO:0035556
Apr9g0897 848 Gene3D - 490 615 IPR036388 -
Apr9g0897 848 SUPERFAMILY "Winged helix" DNA-binding domain 490 578 IPR036390 -
Apr9g0897 848 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 59 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0897 Apr-Chr9 17217538 17225579 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0897 - - ccaj:109814814 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0897 9 17217538 17225579 Apr9g0897 9 17217538 17225579 ECH
Apr9g0897 9 17217538 17225579 Apr1g0126 1 1455606 1460201 PCT