Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0126 ATGGAAAATCAACCAGTAGTGGACACAAAGGAAGCAATTTCTCAAGCTGTTGAGAATCTGCAAGTAGATGATTTGGTTATTGATCAGGGCAAAGAATCAAAGGAGGTAAAACCTCAGATAAATGGTCATGATGGCTCTGAGTTTGAAAATAAACTAGAGGAAATAAATGACATGAACGATATAAGGTCTGAGTCTAATACTAATGAGGGAATACGAGATGTTGTTGTTGGTGAATCTGAATTGGCTCAGAGGAAGGAGGAGAGTAGGGATTTGCAGTCTGGAACTCAACAAGAAGACTTAGAGGGTAAATCTGAGACTGTTGGGGAAGAGGATTCTGGTGATAAGGTGGATGCTAGCGGGGAATTTGAGCCTAGAAGTCAAGAAACAAATCTAGATAGTAATTCTGGACTGAATGACTTGGGTAAAGAGGATGATGACAATAGAGACATTGAATCAGCGCAGGTATATGATAAGACGGATGAAATTCCAACTGAGGACCACAATTTGGAGCCTGTATTTGATGGAACTGAGGTTCCAGGGATGGAAGCTAACCGGAGCATGTCTGGCCGTAGGGCGGATGCTGATCAGGATAGTCCAGGTGTTGTTGAGAAGGCTGTAGCTCTCAAAAATTTTGTTAAGGAGAAAAGTGCAGTGGCAGTCTCCACTATGCTGCGTCGCCTTTCTGGAAAAAGTGATGAAGGTGCTGTGGGTAATTTTGATGATGAAGGTAAGGATGTTTCAGACACCTCAAAGGTTAGTGAAACCAAAATGGGGTCTGAGAAGGCAGTGGAGAAATTTGCCTGGAATCCCTTGAATTACATCAAGAAGTCATCTGATGTTGATGGGGAAATCAAAACTGAGCAGAGAGATTCAATAACTGAAGGTTCACAACCAACCTTAGCCATGAAAGGAAGGATTATATTGTACACAAAACTAGGGTGCCATGAATCTAAGGAGATTAGGCTATTTTTGCGAATGAAAGGGCTTAGATATGTTGAAATCAACATAGATGTATACCCTGGTAGAAAGATGGAGCTGGAGAAGATTTCTGGATCTACTTCAGTTCCAAAGGTTTATTTCAATGAAATACTTATTGGAGGCTTTAGTGAGCTAAAAACCTTAGATGAGTCAGGCAAGCTTGATGAAAAGATTGACTTTCTTATCACTGAAGCACCGTTGTTTGAAGCCCCATCACCACCAATTTCTGGGGAGGATGATGTGTGCAGTAACGGAATGATTGATGAAATGGCAATTATTGTCCGCAAAATGAAAGAATCCATTGCTGTCAAGGACCGATTGTACAAGATGCGCAGGTTCACTAACTGTTTTCTTGGCTCAGAAGCTGTAGATTTCTTATCAGAAGATCAATATTTGGAAAGGCAAGAGGCTGTTGAGTTTGCACGAAAGCTTGCTAACAAACTGTTCTTCCGACACGTGCTTGATGATAATCTATTTGAGGATGGAAATCACTTGTATCGGTTTTTGGATGATGATCCAATTGTGGTGTCACAATGTCACAACATTCCTAGAGGCATAATTACAGCGAAGCCCAAGCCTTTGTCTGAAATTGCATCAAGGCTGAGGTTTCTGTCCCGTGCAATGTTTGAAGCCTATGTTTCTGAAGATGGGCGTCATGTTGACTATGCAAGTATGCATGGAAGTGAGGAGTTTGCAAGGTATCTGAGAATAGTAGAAGAGCTCCAAAGAGTGGAAATATGGGATTTGTCTAGAGAAGAAAAACTTGCGTTCTTTATTAATCTTTATAACATGATGGCCATCCATGCAATCTTAGTATTAGGTCATCCAGATGGAGCACTGGAACGAAGGAAATTATTTGGAGAATTAAAATATCTTATTGGTGGGTTCACCTACTCACTTTCAGCTATTCAAAATGGCATATTGAGGGGAAACCAGCGACCGCCATATAACCTTAAGAAGCCATTTGGTGCAAAAGACAAGCGCTCAAGGGTGGCACTTCCTTATCCCGAGCCTCTTATTCATTTTGCTTTGGTGTATGGTACCCGATCCGGGCCTGCACTTCGGTGCTACTCTCCTGGAAATATTGACGAAGAGTTATTGGATGCAGCACGTAATTTTTTGAGAAATGGAGGCGTTGTAATTGAGTTGACTGCAAAGGCTGTAAATGCCAGTAAAATCCTTAAATGGTATAGTATAGATTTTGGCAAGAACGAGGTAGAGGTGATCAAGCATGTTTCAAACTACTTAGATCCAGCTGACTCAGAAGTATTATTGGACTTGCTTGCTACGTCTGAGATGAAGGTGACTTATCAGCCTTATGACTGGGGTTTGAACAGCTAG 2319 0.4144 MENQPVVDTKEAISQAVENLQVDDLVIDQGKESKEVKPQINGHDGSEFENKLEEINDMNDIRSESNTNEGIRDVVVGESELAQRKEESRDLQSGTQQEDLEGKSETVGEEDSGDKVDASGEFEPRSQETNLDSNSGLNDLGKEDDDNRDIESAQVYDKTDEIPTEDHNLEPVFDGTEVPGMEANRSMSGRRADADQDSPGVVEKAVALKNFVKEKSAVAVSTMLRRLSGKSDEGAVGNFDDEGKDVSDTSKVSETKMGSEKAVEKFAWNPLNYIKKSSDVDGEIKTEQRDSITEGSQPTLAMKGRIILYTKLGCHESKEIRLFLRMKGLRYVEINIDVYPGRKMELEKISGSTSVPKVYFNEILIGGFSELKTLDESGKLDEKIDFLITEAPLFEAPSPPISGEDDVCSNGMIDEMAIIVRKMKESIAVKDRLYKMRRFTNCFLGSEAVDFLSEDQYLERQEAVEFARKLANKLFFRHVLDDNLFEDGNHLYRFLDDDPIVVSQCHNIPRGIITAKPKPLSEIASRLRFLSRAMFEAYVSEDGRHVDYASMHGSEEFARYLRIVEELQRVEIWDLSREEKLAFFINLYNMMAIHAILVLGHPDGALERRKLFGELKYLIGGFTYSLSAIQNGILRGNQRPPYNLKKPFGAKDKRSRVALPYPEPLIHFALVYGTRSGPALRCYSPGNIDEELLDAARNFLRNGGVVIELTAKAVNASKILKWYSIDFGKNEVEVIKHVSNYLDPADSEVLLDLLATSEMKVTYQPYDWGLNS* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0126 772 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 9 771 - -
Apr1g0126 772 MobiDBLite consensus disorder prediction 78 122 - -
Apr1g0126 772 SUPERFAMILY "Winged helix" DNA-binding domain 414 500 IPR036390 -
Apr1g0126 772 MobiDBLite consensus disorder prediction 29 199 - -
Apr1g0126 772 ProSiteProfiles DEP domain profile. 423 496 IPR000591 GO:0035556
Apr1g0126 772 ProSiteProfiles Glutaredoxin domain profile. 294 391 - -
Apr1g0126 772 MobiDBLite consensus disorder prediction 123 137 - -
Apr1g0126 772 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 9 771 - -
Apr1g0126 772 CDD DEP 415 493 - -
Apr1g0126 772 Gene3D Glutaredoxin 301 386 - -
Apr1g0126 772 Pfam Glutaredoxin 306 362 IPR002109 -
Apr1g0126 772 Pfam Protein of unknown function, DUF547 574 700 IPR006869 -
Apr1g0126 772 MobiDBLite consensus disorder prediction 29 60 - -
Apr1g0126 772 SUPERFAMILY Thioredoxin-like 303 385 IPR036249 -
Apr1g0126 772 MobiDBLite consensus disorder prediction 235 255 - -
Apr1g0126 772 SMART DEP_3 423 496 IPR000591 GO:0035556
Apr1g0126 772 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 427 494 IPR000591 GO:0035556
Apr1g0126 772 Gene3D - 407 500 IPR036388 -
Apr1g0126 772 MobiDBLite consensus disorder prediction 138 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0126 Apr-Chr1 1455606 1460201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0126 - - ccaj:109797380 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0126 1 1455606 1460201 Apr1g0126 1 1455606 1460201 ECH
Apr9g0897 9 17217538 17225579 Apr1g0126 1 1455606 1460201 PCT