Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0814 ATGGGTGTGAAAAGCAGGGGAATAGTTTTGCACACAGTTTTGTTATTTGTACTTTTTTCTGCCATTTTCCCACCCGCTTTCTCAGCTGCCAATCAACCTCTCAAAGCCAAGAAACCCACCACTCCATCTTTTGATACTCATCGCCTTCGCTCCTCAGCTGTTTTCAGGGTTCAAGGGAATGTATACCCTCTTGGGCATTACACAGTGTCCCTCAACATTGGCTATCCCCCGAAGCTTTATGACCTTGACATTGACTCAGGTAGCGACCTCACCTGGGTTCAGTGTGATGCACCATGTAAAGGGTGCACCAAGCCTCGTAACCAACTTTATAAACCCAACAACAACCTTGTGCGATGTGTGGACCAATTGTGTGCTGAAGTGCACTCATCAACAGACTATAACTGTGCTACCCCAGATGACCAATGTGACTATGAGGTTGAGTATGCAGATCATGGATCATCTCTGGGTGTGCTGGTCCGAGACTACATTCCCCTTCAATTCACCAATGGCTCAGTGGTGCGGCCGAGGATAGCCTTTGGGTGTGGATATGATCAGAAGTACTTAGGTCCTACTTCGCCACCTTCTACAGCTGGAGTCCTTGGCCTTGGCAACGGCAGAGCAAGCATTTTGTCTCAGCTTCATTCTTTGGGTCTGATCCGCAATGTGGCTGGCCACTGCTTGAGTGGGCAAGGAGGAGGGTTTTTATTCTTTGGAGATGATCTCATTCCCTCTTCAGGAATTGTTTGGATACCCATGCTGCCTAGTTCTTCGGAAAAACACTACAGCTCAGGACCAGCACAGCTGTTTTTCAATGGAAAGGCTACTACTGTTAAGGGTCTTGAACTTATCTTTGATAGTGGGAGCTCTTACACATACTTCAACTCCCAGGCCTATCAAGCTATTGTTGATTTGGTAACTAATGATTTGAAGGGAAACCTGTTGAAAAGAGCAACCGAGGATCCATCACTTCCAATTTGTTGGAAGGGTGCAAAGTCTTTCAAATCTTTAAGTGATGTCAAGAAGTATTTCAAGCCCATAGCATTGAGCTTCACAAAAGCCAAGAATTTGCTGATGCATCTATCACCAGAAGCTTATCTTATTGTCACTAAACATGGCAATGTCTGCTTGGGAATTCTAGATGGCACTGAAGTAGGACTAGAAAATCTTAACATAATAGGAGACATCTCTCTACAAGATAAAATGGTGATTTATGATAACGATAAACAGCAGATTGGATGGGTTTCTTCCAGTTGTGATAGGCTTCCCAATGTGGATCGTGATTTTGAAGGTAATTTTCCACCCCCATATGCAGTCAATTTGGGTATCTTTGGGGATCAGTGCACAGGATCTTATGAAGTAACAACTGGCCAATGA 1374 0.4454 MGVKSRGIVLHTVLLFVLFSAIFPPAFSAANQPLKAKKPTTPSFDTHRLRSSAVFRVQGNVYPLGHYTVSLNIGYPPKLYDLDIDSGSDLTWVQCDAPCKGCTKPRNQLYKPNNNLVRCVDQLCAEVHSSTDYNCATPDDQCDYEVEYADHGSSLGVLVRDYIPLQFTNGSVVRPRIAFGCGYDQKYLGPTSPPSTAGVLGLGNGRASILSQLHSLGLIRNVAGHCLSGQGGGFLFFGDDLIPSSGIVWIPMLPSSSEKHYSSGPAQLFFNGKATTVKGLELIFDSGSSYTYFNSQAYQAIVDLVTNDLKGNLLKRATEDPSLPICWKGAKSFKSLSDVKKYFKPIALSFTKAKNLLMHLSPEAYLIVTKHGNVCLGILDGTEVGLENLNIIGDISLQDKMVIYDNDKQQIGWVSSSCDRLPNVDRDFEGNFPPPYAVNLGIFGDQCTGSYEVTTGQ* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0814 457 SUPERFAMILY Acid proteases 59 423 IPR021109 -
Apr9g0814 457 PRINTS Pepsin (A1) aspartic protease family signature 73 93 IPR001461 GO:0004190|GO:0006508
Apr9g0814 457 PRINTS Pepsin (A1) aspartic protease family signature 282 293 IPR001461 GO:0004190|GO:0006508
Apr9g0814 457 PRINTS Pepsin (A1) aspartic protease family signature 390 405 IPR001461 GO:0004190|GO:0006508
Apr9g0814 457 Gene3D Acid Proteases 44 239 IPR021109 -
Apr9g0814 457 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 282 293 IPR001969 GO:0004190|GO:0006508
Apr9g0814 457 Pfam Xylanase inhibitor C-terminal 281 413 IPR032799 -
Apr9g0814 457 Pfam Xylanase inhibitor N-terminal 67 239 IPR032861 -
Apr9g0814 457 Gene3D Acid Proteases 241 425 IPR021109 -
Apr9g0814 457 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 3 421 - -
Apr9g0814 457 PANTHER ASPARTYL PROTEASES 3 421 IPR001461 GO:0004190|GO:0006508
Apr9g0814 457 ProSiteProfiles Peptidase family A1 domain profile. 67 414 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0814 Apr-Chr9 15632831 15635894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0814 51 422 Miscellaneous Gene Families AT1G44130 60.322 1.28e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0814 - - aprc:113846122 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0814 9 15632831 15635894 Apr7g1117 7 18138019 18140576 ECH
Apr9g0814 9 15632831 15635894 Apr9g0814 9 15632831 15635894 ECH
Apr9g0814 9 15632831 15635894 Apr1g0191 1 2100280 2102985 PCT