Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0191 ATGGATTTGAAAAGCAAGGGAATTTCACTCACCACCCTTTTCTTCTTTCTTCTTCTTTCTGCTATTTTCCCATCCTCTTTCTCTGAAGCCGATCAGCTTCTCGACAGCAAGAAGAAGAAACCAACCCCTCCAATCGCTGCTTTATCCCCTGCTTCTTCTGTTGTTTTCCCTGTTCAAGGAAATGTATATCCGCTTGGGTATTACACGGTGAACCTCGCCATTGGCAATCCCTCCAAGCTTTATGATCTTGACATTGACTCTGGCAGTGATCTCACTTGGGTTCAATGTGATGCACCATGTACAGGTTGCACCAAGCCTCGCCAACAACTTTATAAACCAAATGGCAACCTTGTGCAATGTGCTGATCCCTTGTGTTCTGGAGTCCAGTCAGCACCAAACCATCATTGTACTGCCCCAAATGAACAGTGTGACTATGAAGTTGAGTATGCAGACACAGGATCATCTTTGGGTGTGTTAGTCCGAGATTATATTCCCCTTCGGCTCACTAACGGATCTTCTGTACGCCCAAGGATGGCCTTCGGGTGTGGATATGATCAAACGCATTCTGGTCATAACCCACCACCTTCCACTGCAGGGGTTCTTGGCCTTGGCAATGGCAAGACAAGCATTTTGTCCCAGCTTCATTCTCTTGGTCTAATTCGCAATGTGGTGGGTCACTGCCTAAGTGGGAAAGGAGGGGGATTTTTATTCTTTGGAGACAAGCTCATTCCCTCATCTGGAGTTGTTTGGACACCCATATTGCAGAGTTCCTCAGTAAAACACTATAAATCAGGTCCAGCAGACTTGTTTTTCAATGGGAAGCCAACTTCTGTTAAGGGTCTTGAACTTACCTTTGATAGTGGCAGCTCCTACACATACCTCAATTCCCAAGCTTATAAAGCTTTTGTTGATTTGGTTACTAATGATTTAAAGGGAAAGCCGTTGAATAGAGCAACTGAGGATTCATCACTACCGATTTGTTGGAAGGGTGCAAAGCCTTTCAAACATCTACGTGATGTCACTAACTATTTTAAGCCCCTGCTACTTAGTTTCACAAAATCTAAGAATTCGCAGCTGAACCTACCACCAGAAGCTTATCTAATTGTCACTAAACATGGCAATGTCTGCTTGGGGATTCTAGATGGCACTGAAATAGGACTAGGAAGTATTAACATAATTGGAGATATCTCTTTACAAGATAAGATAGTAATTTATGACAACGAGAAACAGCAAATTGGATGGGCCTCTGCAACTTGTGATAGACTTCCCAAGTCATAA 1278 0.4351 MDLKSKGISLTTLFFFLLLSAIFPSSFSEADQLLDSKKKKPTPPIAALSPASSVVFPVQGNVYPLGYYTVNLAIGNPSKLYDLDIDSGSDLTWVQCDAPCTGCTKPRQQLYKPNGNLVQCADPLCSGVQSAPNHHCTAPNEQCDYEVEYADTGSSLGVLVRDYIPLRLTNGSSVRPRMAFGCGYDQTHSGHNPPPSTAGVLGLGNGKTSILSQLHSLGLIRNVVGHCLSGKGGGFLFFGDKLIPSSGVVWTPILQSSSVKHYKSGPADLFFNGKPTSVKGLELTFDSGSSYTYLNSQAYKAFVDLVTNDLKGKPLNRATEDSSLPICWKGAKPFKHLRDVTNYFKPLLLSFTKSKNSQLNLPPEAYLIVTKHGNVCLGILDGTEIGLGSINIIGDISLQDKIVIYDNEKQQIGWASATCDRLPKS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0191 425 PANTHER ASPARTYL PROTEASES 2 422 IPR001461 GO:0004190|GO:0006508
Apr1g0191 425 Gene3D Acid Proteases 46 240 IPR021109 -
Apr1g0191 425 Gene3D Acid Proteases 241 422 IPR021109 -
Apr1g0191 425 ProSiteProfiles Peptidase family A1 domain profile. 68 415 IPR033121 -
Apr1g0191 425 Pfam Xylanase inhibitor C-terminal 282 415 IPR032799 -
Apr1g0191 425 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 422 - -
Apr1g0191 425 SUPERFAMILY Acid proteases 60 422 IPR021109 -
Apr1g0191 425 Pfam Xylanase inhibitor N-terminal 68 240 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0191 Apr-Chr1 2100280 2102985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0191 49 425 Miscellaneous Gene Families AT1G44130 61.376 3.48e-176 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0191 - - gmx:100803640 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0814 9 15632831 15635894 Apr1g0191 1 2100280 2102985 PCT