Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr9g0748 | ATGGTTGGCAAGGAGAGTTTGAGGAGTGGGGTATTGAACTTGGGCTTTGAGAAACTTATGATGGTTGGTGCTGGCGGGATCATGGAATGGAAGGATATTCCAGTGGAGCTTTTGATGCAAATTCTGTCACTTGTTGATGATCAAACAGTGATCACAGCTTCTGAAGTTTGTCGTGGGTGGAGAGAGGCAATTTGCTTTGGCCTGACTCGTTTATCGCTCTCATGGTGTAGCAAGAACATGAATAACTTGGTCCTCTCTCTTGCTCCTAAGTTCACAAATTTGCAAACTCTAATCCTTCGTCAAGACAAGCCTCAACTAGAAGACAATACGGTTGAGACTATTGCAAATTTCTGTCATGACCTGCAAATCCTGGACCTCAGCAAAAGCTTCAAGCTTACTGATTGTTCACTGTATGCCGTAGCCCATGGTTGTCATGATCTCACAAAACTGAACATCAGTGGTTGTTCAGCCTTTAGTGATAAAGCTCTGGCTTACCTAGCCAGTTTACGCAGAAAACTCAAAGTTTTGAATCTCTGTGGATGTGTTAAAGCTGCATCTGATATTGCATTACAGGCAATTGGACATTACTGCAATGAGTTACAGTCTTTGAACCTTGGATGGTGTGAAAATGTCAGTGATGTTGGAGTGATGAGTTTAGCATATGGGTGCCCTGATCTTAGAACACTTGACTTATGTGGCTGTGTCCTTATAACAGATGATAGTGTAATTGCCTTGGCAAATAGATGTCCTCATCTGAGGTCCCTTGGACTGTACTATTGCCAAAACATAACAGACAGAGCAATGTATTCTTTGGCACAAAGCAAAGTGAATAATAGGATGTGGGGATCTTTGAAAAGTGGAAGTGATGAGGATGGACTAAGGACTTTGAACATTAGCCAATGCACAGCACTCACACCTTCTGCTGTTCAGGCTGTGTGTGACTCATTCCCTTCACTTCACACATGTTCTGGAAGACACTCACTCATCATGAGTGGTTGCCTCAATTTGACATCTGTGCATTGTGCTTGTGCTGTCCATGCACACCGTGCCATTAGCATTCTTCCTCATCCTGCTCATTGA | 1080 | 0.4324 | MVGKESLRSGVLNLGFEKLMMVGAGGIMEWKDIPVELLMQILSLVDDQTVITASEVCRGWREAICFGLTRLSLSWCSKNMNNLVLSLAPKFTNLQTLILRQDKPQLEDNTVETIANFCHDLQILDLSKSFKLTDCSLYAVAHGCHDLTKLNISGCSAFSDKALAYLASLRRKLKVLNLCGCVKAASDIALQAIGHYCNELQSLNLGWCENVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCQNITDRAMYSLAQSKVNNRMWGSLKSGSDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCSGRHSLIMSGCLNLTSVHCACAVHAHRAISILPHPAH* | 360 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr9g0748 | 359 | SUPERFAMILY | F-box domain | 23 | 65 | IPR036047 | GO:0005515 | |
| Apr9g0748 | 359 | Gene3D | Ribonuclease Inhibitor | 67 | 286 | IPR032675 | - | |
| Apr9g0748 | 359 | PANTHER | F-BOX SKP2A-LIKE PROTEIN | 1 | 341 | - | - | |
| Apr9g0748 | 359 | Gene3D | - | 27 | 66 | - | - | |
| Apr9g0748 | 359 | PANTHER | UNCHARACTERIZED | 1 | 341 | - | - | |
| Apr9g0748 | 359 | Pfam | Leucine Rich repeat | 223 | 246 | IPR001611 | GO:0005515 | |
| Apr9g0748 | 359 | Pfam | Leucine Rich repeat | 197 | 220 | IPR001611 | GO:0005515 | |
| Apr9g0748 | 359 | Pfam | Leucine Rich repeat | 249 | 272 | IPR001611 | GO:0005515 | |
| Apr9g0748 | 359 | Pfam | F-box-like | 31 | 64 | IPR001810 | GO:0005515 | |
| Apr9g0748 | 359 | ProSiteProfiles | F-box domain profile. | 27 | 64 | IPR001810 | GO:0005515 | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 170 | 196 | IPR006553 | - | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 249 | 274 | IPR006553 | - | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 118 | 143 | IPR006553 | - | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 144 | 169 | IPR006553 | - | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 290 | 315 | IPR006553 | - | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 197 | 222 | IPR006553 | - | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 91 | 117 | IPR006553 | - | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 65 | 90 | IPR006553 | - | |
| Apr9g0748 | 359 | SMART | LRR_CC_2 | 223 | 248 | IPR006553 | - | |
| Apr9g0748 | 359 | SUPERFAMILY | RNI-like | 62 | 273 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr9g0748 | Apr-Chr9 | 13304670 | 13308795 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr9g0748 | K03875 | - | gmx:100793275 | 634.024 |
Event-related genes