Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0387 ATGTCCGACCCGGAAATCCAACCCGAACAACACTCCGCTCCGTCACAAACCGACCCGATAACCACCAAACCCGAAACCATCTCCTTCAGCATATGGCCTCCCACGCAGCGAACCCGCGACGCTGTCATCAACCGCTTGATTGAGACACTCTCCAACACCTCCATCCTCTCCAAGCGCTACGGCACTCTCTCCTCCGACGAAGCCTCCGCCGCCGCTCGTCAGATCGAGGACGAGGCTTTCTCCGCCGCTGGTGTCTCCTCGTCCTCCTCCGCCGACGGCATTGAGATCCTCCAGGTCTACTCGAAGGAGATCAGCAAACGCATGCTCGACACCTTCAAGGCCAGAGCTCCCCCGGCCTCCGACGTTGCTCCACCCTCAGCCGCCGCCGTTTCCGACTCTTGA 402 0.6095 MSDPEIQPEQHSAPSQTDPITTKPETISFSIWPPTQRTRDAVINRLIETLSNTSILSKRYGTLSSDEASAAARQIEDEAFSAAGVSSSSSADGIEILQVYSKEISKRMLDTFKARAPPASDVAPPSAAAVSDS* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0387 133 MobiDBLite consensus disorder prediction 1 27 - -
Apr9g0387 133 Gene3D WPP domain 28 122 IPR038214 -
Apr9g0387 133 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 8 129 - -
Apr9g0387 133 Pfam WPP domain 28 119 IPR025265 -
Apr9g0387 133 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 8 129 IPR044692 GO:0000278|GO:0048527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0387 Apr-Chr9 5233264 5233772 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0387 - - gmx:547538 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0387 9 5233264 5233772 Apr9g0387 9 5233264 5233772 ECH
Apr9g0387 9 5233264 5233772 Apr5g1485 5 18824375 18825215 PCT