Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1485 ATGTCCGACCCGGAAATCGCACCCGCCGCCGCATCGGAGCAAGACTCCGCTCCAACGCAGCAGCACAACCAAGACCAACCACCGGCCACCGCCAAACTCCCCCCCGCCGGCATCTCCTTCAGCATTTGGCCGCCCACTCAACGCACCCGCGACGCCGTCATCAACCGCTTAATCGAAACCCTATCCACTCCCTCCGTCCTCTCCAAGCGCTACGGTACAATGCCCCCCGACGAGGCCTCTGCCGCTGCGCGCCAGATCGAGGATGAGGCCTTCTCCGCCGCCGGTGGTTCCGCCGCTTCCGACAACGACGGCATCGAGATCCTCCAGGTATATTCCAAGGAGATCAGCAAACGGATGCTTGACACCGTTAAGGCCAGAGCTACCACAGGTTCCAACGCCGTCGATAACGGCGTTGATCAGAACCCTACCTCCGATGTTACTCCTTCCTCCGCCGCAGAGAGCGCCCCTGCTGCCGCCGAATCCGAAACCTGA 492 0.624 MSDPEIAPAAASEQDSAPTQQHNQDQPPATAKLPPAGISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMPPDEASAAARQIEDEAFSAAGGSAASDNDGIEILQVYSKEISKRMLDTVKARATTGSNAVDNGVDQNPTSDVTPSSAAESAPAAAESET* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1485 163 Gene3D WPP domain 39 135 IPR038214 -
Apr5g1485 163 MobiDBLite consensus disorder prediction 128 156 - -
Apr5g1485 163 MobiDBLite consensus disorder prediction 13 28 - -
Apr5g1485 163 Pfam WPP domain 39 130 IPR025265 -
Apr5g1485 163 MobiDBLite consensus disorder prediction 128 163 - -
Apr5g1485 163 MobiDBLite consensus disorder prediction 1 44 - -
Apr5g1485 163 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 1 153 IPR044692 GO:0000278|GO:0048527
Apr5g1485 163 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1485 Apr-Chr5 18824375 18825215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1485 - - vun:114162267 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1485 5 18824375 18825215 Apr5g1485 5 18824375 18825215 ECH
Apr9g0387 9 5233264 5233772 Apr5g1485 5 18824375 18825215 PCT