Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0303 ATGGAACGTGCTCGAAGACTCGCAAACCGTGCCATTCTGAAGCGTCTGGTTTCAGAGGCGAAGCAGTGTCGGAAGGATGAATCGGTGCTGAACTCTTCCACCACCCCTGTGTTGTTGTACTCTTCATCAAGGTGTGTGTCCTCTGTTTCTTCTCCTGTTCTGCGAAACAGGGGATCCAAATCAGATAACAACTTTCTGGGAAGGAACATCAACAACATGTCGTCACGCAACGTTGTTGGCTTCCTCGGAGCTGGTTCTATCTCCCAAATCCGATCCATCTCAGTGCAAGCGCTTCAACCAAGTGACACTTTCCCGAGGCGCCATAACTCTGCTACCCCAGAAGAACAAAGCAAAATGGCTAAATCATGTGGATTTGAAGACCTTGATTCACTGGTTGATGCTACAGTGCCAAAATCGATTCGTTTGAAGGAAATGAAGTTTAGCAAGTTTGATGCAGGGTTAACAGAGAGCCAAATGATTGAGCACATGCAGGACTTAGCCTCAAAGAACAAGGTTTTCAAGTCTTACATTGGAATGGGTTACTATAACACTTATGTTCCACCAGTGATCTTGAGGAACATAATGGAAAATCCTGCATGGTACACTCAGTACACCCCTTATCAAGCAGAGATATCTCAGGGTCGTCTTGAATCACTGTTGAATTTTCAGACCATGATCACTGATCTCACTGGTTTGCCTATGTCCAATGCTTCATTGCTTGATGAAGGAACTGCTGCAGCTGAAGCAATGTCAATGTGTAATAACATTCAGAAAGGGAAGAAGAAGACATTCATAATTGCAAGTAACTGTCACCCTCAAACCATTGATATTTGTAAGACTAGAGCTGCAGGTTTTGATCTTAACGTTGTTACTCAAGATCTTAAGGATATTGATTACAAATCTGGGGATGTTTGTGGTGTGCTTGTTCAGTATCCTGGTACTGAGGGTGAGGTTTTGGATTATGGGGAGTTTGTTAAGAAGGCTCATGCTCATGAGGTGAAGGTTGTCATGGCAAGTGATTTATTGGCATTAACTGTGTTGAAGCCTCCTGGTGAGTTTGGGGCTGATATAGTTGTTGGATCAGCTCAAAGGTTTGGGGTTCCAATGGGGTATGGAGGTCCTCATGCAGCTTTCTTGGCCACATCACAAGAGTACAAGAGGATGATGCCTGGGAGAATCATTGGTGTCAGTGTTGATTCTTCTGGGAAGACGGCTTTGCGAATGGCGATGCAAACTAGGGAGCAGCATATCCGAAGGGACAAGGCCACCAGCAACATTTGCACTGCTCAGGCACTGCTTGCAAACATGGCTGCCATGTATGCTGTATACCATGGACCTGAAGGACTTAAAAACATTGCCCAACGCGTTCATGGTCTTGCTGGTGTGTTTGCTCTTGGATTAAAGAAACTTGGAACGGTGGAAGTTCAAGACCTTCCCTTCTTTGACACTGTGAAGGTTAAGACTGCCAATGCCCATGCAATTGCAGATGCTGCTCTCAAAAGTGAAATAAATTTGCGAGTTGTGGATGGCAACACTATCACTGTTGCTTTTGATGAAACAACCACATTAGAGGATGTTGATAAGCTTTTCAAAGTTTTTGCTGGTGGCAAGCCTGTGTCCTTCGCAGCTGCATCTATTGCACCAGAAGTTCAGAATGCAATTCCTTCTGGATTAACTAGGAAGAGCCCTTATTTGACACACTCTATCTTTAACACGTACCAAACTGAGCATGAGTTGCTTAGATACATTCATAGGCTACAATCAAAAGATCTATCACTATGCCACAGTATGATCCCACTGGGATCTTGTACAATGAAACTGAATGCAACGACTGAAATGATGCCTGTGACATGGCCCAACTTCACTGATATTCACCCTTTTGCACCAGTTGACCAGGCTCAAGGTTATCAGGAAATGTTCAACAATTTGGGTGAACTGTTGTGTACAATCACTGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGTGCTGCTGGAGAATATGCTGGACTGATGGTTATTCGTGCTTATCATTTGGCAAGAGGAGACCCCCACCGTGATGTTTGCATTATACCTGTCTCAGCACATGGCACAAATCCTGCTAGTGCTGCTATGTGTGGAATGAAAATTGTCCCCGTTGGAACTGATGCCAAGGGAAACATTAATATAGAACAGTTGAGGAAGGCTGCTGAAACACACAAGGACAACTTGTCTGCACTTATGGTTACATATCCTTCAACTCATGGTGTTTATGAAGAAGGTATTGATGAGATTTGCAAGATTATTCATGATAATGGAGGCCAAGTGTATATGGATGGTGCCAACATGAATGCACAGGTGGGACTTACAAGCCCAGGTTGGATTGGAGCTGATGTTTGCCATCTCAATCTCCACAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCGTTTTTACCTTCACACCCTGTGGTACCAACTGGTGGAATTCCTGCGCCTGACAAATCTCAACCACTTGGTACCATCTCTGCTGCACCATGGGGCTCCGCACTCATATTGCCAATCTCTTACACTTACATAGCCATGATGGGTTCTAAAGGACTCACCGATGCATCAAAGATAGCCATTTTGAATGCGAACTACATGGCAAAACGCTTGGAGAGTTATTACCCAGTCCTTTTCCGTGGAGTCAATGGAACAGTTGCTCATGAATTCATTATTGACTTAAGAGGCTTTAAGAATACTGCTGGAATAGAGCCGGAAGATGTTGCAAAGCGCCTCATGGACTACGGTTTTCATGGACCAACAATGTCGTGGCCTGTGCCTGGTACCCTCATGGTTGAGCCCACTGAGAGTGAAAGCAAGGCTGAGTTAGACAGGTTCTGTGATGCTCTTATTTCCATTAGAAAAGAAATTGCTGAGATTGAGAAAGGAAAGGCTGACATTAATAACAATGTACTTAAGGGTGCCCCTCATCCACCATCACTGCTCATGCATCACAAGCTGTTGAAGAACAAGCTGCTGTCTCAGCCTAGTGTTCCACTCAACTATTCTAAATTCTAG 3081 0.446 MERARRLANRAILKRLVSEAKQCRKDESVLNSSTTPVLLYSSSRCVSSVSSPVLRNRGSKSDNNFLGRNINNMSSRNVVGFLGAGSISQIRSISVQALQPSDTFPRRHNSATPEEQSKMAKSCGFEDLDSLVDATVPKSIRLKEMKFSKFDAGLTESQMIEHMQDLASKNKVFKSYIGMGYYNTYVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRAAGFDLNVVTQDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFVKKAHAHEVKVVMASDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKTALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKNIAQRVHGLAGVFALGLKKLGTVEVQDLPFFDTVKVKTANAHAIADAALKSEINLRVVDGNTITVAFDETTTLEDVDKLFKVFAGGKPVSFAAASIAPEVQNAIPSGLTRKSPYLTHSIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPNFTDIHPFAPVDQAQGYQEMFNNLGELLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDPHRDVCIIPVSAHGTNPASAAMCGMKIVPVGTDAKGNINIEQLRKAAETHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPDKSQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMVEPTESESKAELDRFCDALISIRKEIAEIEKGKADINNNVLKGAPHPPSLLMHHKLLKNKLLSQPSVPLNYSKF* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0303 1026 CDD GDC-P 156 533 IPR020581 GO:0004375|GO:0006546
Apr9g0303 1026 Gene3D Aspartate Aminotransferase, domain 1 867 1002 IPR015422 GO:0003824
Apr9g0303 1026 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1008 - -
Apr9g0303 1026 SUPERFAMILY PLP-dependent transferases 107 533 IPR015424 -
Apr9g0303 1026 Gene3D Aspartate Aminotransferase, domain 1 176 529 IPR015422 GO:0003824
Apr9g0303 1026 TIGRFAM gcvP: glycine dehydrogenase 107 999 IPR003437 GO:0004375|GO:0006544
Apr9g0303 1026 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1008 IPR020581 GO:0004375|GO:0006546
Apr9g0303 1026 Gene3D - 615 866 IPR015421 GO:0003824
Apr9g0303 1026 Gene3D - 187 447 IPR015421 GO:0003824
Apr9g0303 1026 SUPERFAMILY PLP-dependent transferases 572 984 IPR015424 -
Apr9g0303 1026 Coils Coil 723 743 - -
Apr9g0303 1026 Pfam Glycine cleavage system P-protein 107 533 IPR020581 GO:0004375|GO:0006546
Apr9g0303 1026 Pfam Glycine cleavage system P-protein 550 826 IPR020581 GO:0004375|GO:0006546
Apr9g0303 1026 CDD GDC-P 576 971 IPR020581 GO:0004375|GO:0006546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0303 Apr-Chr9 3969006 3975849 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0303 K00281 - gmx:100777528 1848.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0303 9 3969006 3975849 Apr5g1407 5 18179859 18185562 PCT