Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0183 ATGGCTTCCAACAAGCTCATTGCTACCATTTTGGTGCTTTCCCTCCTTACCTACACAACATTCACAAATGCTTGTGGGACATGCCACCCTAAGGCTACCCCTCCTCCTGCATCTGGGAAGTGTCCCAAAGACACATTGAAGCTTGGTGTTTGTGCTGACATCCTTGGACTTGTTAATGTTGTTGTTGGGTCTCCTGTTTCTAGCAAGTGTTGTGCATTGCTTGAGGGTTTGGCTGATGTGGAGGCAGCACTTTGCCTTTGCACTGCCATTAAGGCCAATGTTCTTGGGATCAACTTGAACGTACCAGTCACACTCAGTGTGCTACTTAGTGCTTGTCAAAAATCGGTTCCTACTGGCTTCCAGTGTGCATAG 372 0.4758 MASNKLIATILVLSLLTYTTFTNACGTCHPKATPPPASGKCPKDTLKLGVCADILGLVNVVVGSPVSSKCCALLEGLADVEAALCLCTAIKANVLGINLNVPVTLSVLLSACQKSVPTGFQCA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0183 123 Gene3D - 38 123 IPR036312 -
Apr9g0183 123 PANTHER LIPID TRANSFER PROTEIN 1 25 - -
Apr9g0183 123 PANTHER LIPID TRANSFER PROTEIN 25 123 - -
Apr9g0183 123 CDD HPS_like 39 122 IPR027923 -
Apr9g0183 123 SMART aai_6 41 122 IPR016140 -
Apr9g0183 123 PANTHER - 25 123 - -
Apr9g0183 123 PANTHER - 1 25 - -
Apr9g0183 123 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 44 122 IPR036312 -
Apr9g0183 123 Pfam Hydrophobic seed protein 41 123 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0183 Apr-Chr9 2362417 2365323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0183 33 122 Acyl Lipid Metabolism Gene Families AT4G22490 41.304 2.19e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0183 - - gmx:547594 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0183 9 2362417 2365323 Apr9g0183 9 2362417 2365323 ECH
Apr9g0183 9 2362417 2365323 Apr5g1276 5 17089819 17090543 PCT