Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0168 ATGGGTAGGGGAGATATTAAGCTATTTGATGAGGAAAGAAATGGTCTTTTCTCAATTTCGAATTTTGGGTCCCTTCTCAATGAGGAAGGGAGTTACCCTTCTATGGGTTTGTTTGCAAGCATTGGTCAAATGGGAATGGGGTTTGGTGTAAAAGAACCGAACCCTTCTGGTTCTCAACAACACAACGGTGGCATGAGTATGAGGATTCCATGCACTGAGTTGTATGTGAGGTATGTGCAATCAGAGGGGAAGGTGAAGATTCTTGGGGTTCCTGAGGAAGAGGAAGAGGTGGTGGAAGGGGTTAAGAGAAAGAAAAAGGGTGTCTTTAAAGGGTTGAAGATTAAGGTTAAGAACCCTTCACTAAGGAGATTGATTAGTGGTGGTTTTGCTGGGGCAGTTTCACGTACCACTGTGGCACCTTTGGAGACTATAAGGACACATTTGATGGTTGGAAGCAGTGGCCATTCTACTGGTGAGGTGTTTAAGAATATCATGAAGACTGATGGGTGGAAGGGGCTGTTTCGGGGTAATTTTGTTAATGTAATTCGGGTTGCACCTAGCAAGGCCATTGAGCTATTTGCTTATGATACTGTTAACAAGAACCTCTCACCAAAGCCTGGGGAACAGCCTAAACTCCCTATTCCTCCATCATTGATTGCAGGTGCTTGTGCTGGAGTTAGTTCAACCATATGCACATACCCTCTGGAGTTACTCAAGACTCGATTAACTATCCAGAGAGGCGTTTATGACGGTCTACTTGATGCATTCTTGAAAATCGTTCGAGAAGAGGGTGCTGGAGAACTTTATAGAGGCCTTACTCCAAGTCTGATTGGAGTTATTCCATACTCTGCAACCAATTACTTTGCATATGACAGTCTAAGGAAAGCATACAGAAAAATTTTCAAAAAAGAAAAGATTGGCAACATTGAAACCCTTTTGATAGGATCAGCAGCTGGTGCTATTTCAAGTAGCGCCACTTTTCCTCTTGAAGTGGCTCGCAAGCATATGCAAGTGGGAGCCCTCAGTGGAAGACATGTTTACAAGAATGTGATTCATGCTCTTGCAAGCATCCTTGAACAAGAAGGGATTCAGGGATTGTATAGAGGGTTGGGACCTAGCTGCATGAAGTTGGTACCAGCTGCAGGAATCTCTTTCATGTGCTATGAAGCATGCAAGAGGATACTGGTAGAGGATGATGATGAAGAATAG 1209 0.4367 MGRGDIKLFDEERNGLFSISNFGSLLNEEGSYPSMGLFASIGQMGMGFGVKEPNPSGSQQHNGGMSMRIPCTELYVRYVQSEGKVKILGVPEEEEEVVEGVKRKKKGVFKGLKIKVKNPSLRRLISGGFAGAVSRTTVAPLETIRTHLMVGSSGHSTGEVFKNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPIPPSLIAGACAGVSSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDSLRKAYRKIFKKEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRHVYKNVIHALASILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKRILVEDDDEE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0168 402 Pfam Mitochondrial carrier protein 306 397 IPR018108 -
Apr9g0168 402 Pfam Mitochondrial carrier protein 119 202 IPR018108 -
Apr9g0168 402 Pfam Mitochondrial carrier protein 212 299 IPR018108 -
Apr9g0168 402 SUPERFAMILY Mitochondrial carrier 119 390 IPR023395 -
Apr9g0168 402 Gene3D Mitochondrial carrier domain 114 400 IPR023395 -
Apr9g0168 402 PRINTS Mitochondrial carrier protein signature 123 136 IPR002067 GO:0055085
Apr9g0168 402 PRINTS Mitochondrial carrier protein signature 136 150 IPR002067 GO:0055085
Apr9g0168 402 PRINTS Mitochondrial carrier protein signature 176 196 IPR002067 GO:0055085
Apr9g0168 402 PRINTS Mitochondrial carrier protein signature 227 245 IPR002067 GO:0055085
Apr9g0168 402 PRINTS Mitochondrial carrier protein signature 269 287 IPR002067 GO:0055085
Apr9g0168 402 PRINTS Mitochondrial carrier protein signature 315 337 IPR002067 GO:0055085
Apr9g0168 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 306 394 IPR018108 -
Apr9g0168 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 201 IPR018108 -
Apr9g0168 402 PANTHER SOLUTE CARRIER FAMILY 25 31 401 - -
Apr9g0168 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 296 IPR018108 -
Apr9g0168 402 PANTHER ADENINE NUCLEOTIDE TRANSPORTER BT1, CHLOROPLASTIC/MITOCHONDRIAL 31 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0168 Apr-Chr9 2205069 2208123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0168 303 402 Organic Solute Cotransporters AT4G32400 32.353 3.69e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0168 K14684 - gmx:100816041 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0168 9 2205069 2208123 Apr9g0168 9 2205069 2208123 ECH
Apr9g0168 9 2205069 2208123 Apr5g1245 5 16862224 16866723 PCT