Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1245 ATGGGTAGGAGGGGAATCCAATTATTTGATGAGAAAAGAGATGGGTTTTTCTCTGTCAACAATTTGGGGTTTGAATCTGAAAATGGGTACTATCACCCTGGAGGTTTGTTTGCCAGCGTTGGTCAAATGGGAATGGGGTTTGGGGTGCAACCCAATAACCCTTCTGATTCACGCGACAATGGTGGCCTGAAACTGCCCTTTAACGAATTGTTCCTCAAGTATGTTCAATCGCAGGGTAAAGATGAGGTTGTTGAGGAAAGGGTTAAGAGCAAGAAGAAAAGAAGTGGCCTTTCACTCAAAATTAAGATCAGGAACCCTTCTTTGAGAAGGTTGTTTAGTGGAGCAGTTGCAGGGGCTGTGTCTCGCACTGCAGTGGCACCATTGGAGACTATAAGGACTCACTTAATGGTGGGGAGTAGTGGCCATTCTACCACTGAAGTGTTCAACAATATTATGAAAACTGATGGGTGGAAGGGATTGTTTAGGGGTAACCTTGTTAATGTTATTCGGGTTGCTCCTAGCAAGGCCATTGAGCTATTTGCTTACGACACAGTAAACAAGAACCTATCCCCAAAGCCCGGGGAGCAGTCCAAACTCCCAATTCCTGCATCATTGATTGCAGGTGCATGTGCTGGAGTGAGTTCAACTATATGCACATATCCTCTTGAATTACTCAAGACTCGACTAACTATCCAGAGAGGTGTTTACGATGGTCTGCTCGATGCATTCTTGAAAATAGTTCAAGAAGAGGGTCCTGCAGAACTTTATAGGGGCCTCGCACCTAGTCTTATTGGAGTTATTCCATATTCTGCTACCAATTACTTTGCCTACGACACTTTGCGGAAGGCATACCGGAAAATTTTTAAACAAGAGAAGATTGGCAACATTGAAACCCTTTTGATTGGTTCAGCAGCTGGTGCTATTTCTAGTAGTGCAACTTTTCCACTCGAGGTGGCTCGCAAGCATATGCAAGTTGGAGCTCTCAGTGGAAGGCAGGTTTACAAGAATGTGGTTCATGCCCTTGCAAGCATACTAGAACAAGAAGGGATTCAAGGTTTATATAGAGGGCTGGGACCGAGTTGCATGAAGTTGGTGCCAGCCGCCGGAATATCTTTCATGTGCTACGAAGCATGCAAGAGGATACTGGTAGATAACGAGGATGAGGAATAG 1170 0.4487 MGRRGIQLFDEKRDGFFSVNNLGFESENGYYHPGGLFASVGQMGMGFGVQPNNPSDSRDNGGLKLPFNELFLKYVQSQGKDEVVEERVKSKKKRSGLSLKIKIRNPSLRRLFSGAVAGAVSRTAVAPLETIRTHLMVGSSGHSTTEVFNNIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQSKLPIPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVQEEGPAELYRGLAPSLIGVIPYSATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVVHALASILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKRILVDNEDEE* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1245 389 Pfam Mitochondrial carrier protein 107 189 IPR018108 -
Apr5g1245 389 Pfam Mitochondrial carrier protein 293 385 IPR018108 -
Apr5g1245 389 Pfam Mitochondrial carrier protein 198 286 IPR018108 -
Apr5g1245 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 188 IPR018108 -
Apr5g1245 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 199 283 IPR018108 -
Apr5g1245 389 PRINTS Mitochondrial carrier protein signature 110 123 IPR002067 GO:0055085
Apr5g1245 389 PRINTS Mitochondrial carrier protein signature 123 137 IPR002067 GO:0055085
Apr5g1245 389 PRINTS Mitochondrial carrier protein signature 163 183 IPR002067 GO:0055085
Apr5g1245 389 PRINTS Mitochondrial carrier protein signature 214 232 IPR002067 GO:0055085
Apr5g1245 389 PRINTS Mitochondrial carrier protein signature 256 274 IPR002067 GO:0055085
Apr5g1245 389 PRINTS Mitochondrial carrier protein signature 302 324 IPR002067 GO:0055085
Apr5g1245 389 SUPERFAMILY Mitochondrial carrier 106 377 IPR023395 -
Apr5g1245 389 Gene3D Mitochondrial carrier domain 102 387 IPR023395 -
Apr5g1245 389 PANTHER SOLUTE CARRIER FAMILY 25 25 388 - -
Apr5g1245 389 ProSiteProfiles Solute carrier (Solcar) repeat profile. 293 381 IPR018108 -
Apr5g1245 389 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 25 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1245 Apr-Chr5 16862224 16866723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1245 292 389 Organic Solute Cotransporters AT4G32400 32.000 6.69e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1245 K14684 - gmx:100810035 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0168 9 2205069 2208123 Apr5g1245 5 16862224 16866723 PCT