Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0148 ATGGCCACTACTCTCTCTGAGGCCTATAGAGACTACCCTCTCCACCTCCATCATATTATCCCCTTAGACTTTTCTTCAATAAAGACCTTACCTGATTCCCATGCATGGCCTCAATCTGAAGATTATGATAATGATGGACCTGAATCATGCATACCCATCATTGACCTCATGGATCCTAATGCCATGAAACTAATAGGCCTTGCTTGTGAGAAATGGGGTGCTTTCCAATTGAATAACCATGGCATAAACTTGAGTGTTATTGAAGAGGTTGAAGAAGAGGCAAAGAGGCTCTTTGCTCTCCCCGCCGACCGGAAATTGAAGGCCCTAAGATCTGCCGCTGGCGCCACCGGATACGGCCGAGCTCGGATATCTCCATTTTTCCCCAAGCACATGTGGCATGAGGGGTTTACCATCATGGGTTCTCCATGTGATGATGCCAAAAAAATTTGGCCTAATGACTATGCACGGTTTTGTGGAATAATGGAGAATTACCAAAAGCAAATGAAGGCACTAGCTGAGAAGCTAACACACATGATATTCAACTCATTGGAAATTTCTGAGGAACAAAAGAGGTGGGTTGGTTCAACCAACCTATGTGAAGCTGTTCAACTAAATTTCTACCCATGTTGTCCAGAGCCTGACCGAGCCATGGGTCTAGCCCCTCACACGGACACATCGTTTCTCACAATCCTCCACCAAAGCCAAACCAATGGCCTCCAAATCTTCAAGGAAGGTGCAGGATGGGTTCCGGTGCACCCTCACCCTAACACCCTTGTTGTGAACACTGGTGACATTCTTCATATTTTGTCCAATTCAAGGTTCCGTTGTGCTCTACATCGTGTCACAGTTAATAGTACTAAGCATAGATACTCAATGGCTTATTTTTATAGCCCCCCATTAGATTATGTAGTGTCTCCTTTGGTCGTTAATTCCATACCCCATTTTCGGACTTTGACTGTGAAGGAGTATATTGGCATTAAAGCCAAGAATCTTGGGGGAGCATTGTCTTTGATTAGTATGCTTAAAAGCTAA 1032 0.4448 MATTLSEAYRDYPLHLHHIIPLDFSSIKTLPDSHAWPQSEDYDNDGPESCIPIIDLMDPNAMKLIGLACEKWGAFQLNNHGINLSVIEEVEEEAKRLFALPADRKLKALRSAAGATGYGRARISPFFPKHMWHEGFTIMGSPCDDAKKIWPNDYARFCGIMENYQKQMKALAEKLTHMIFNSLEISEEQKRWVGSTNLCEAVQLNFYPCCPEPDRAMGLAPHTDTSFLTILHQSQTNGLQIFKEGAGWVPVHPHPNTLVVNTGDILHILSNSRFRCALHRVTVNSTKHRYSMAYFYSPPLDYVVSPLVVNSIPHFRTLTVKEYIGIKAKNLGGALSLISMLKS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0148 343 Pfam 2OG-Fe(II) oxygenase superfamily 201 298 IPR044861 -
Apr9g0148 343 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 151 IPR026992 -
Apr9g0148 343 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 195 298 IPR005123 -
Apr9g0148 343 Gene3D - 17 330 IPR027443 -
Apr9g0148 343 SUPERFAMILY Clavaminate synthase-like 17 331 - -
Apr9g0148 343 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 334 - -
Apr9g0148 343 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 12 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0148 Apr-Chr9 1758505 1760432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0148 51 334 Glycosyltransferase AT5G59530 29.904 1.82e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0148 K04124 - gmx:100780857 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1218 5 16638931 16640570 Apr9g0148 9 1758505 1760432 PCT