Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1218 ATGGAAACTCTCTCTGAAGCCTACAGAGAACACCCTCTCCACCTCCGTCATATTATCCCCTTAGACTTTTCTTCAGTCCTTAGCTTACCAGATTCCCACTCATGGTCTCTATCTCAAGATAATGATTATTTTTCGTTCAAGGATACTTCATCATCATCCATACCCATCATAGACCTCATGGATCCTAATGCTAAGGAACTCATAGGCCTTGCATGTGAACAATGGGGTGCTTTCCAAATAAAGAATCATGGCATACCCTTAAGTGTTATTGAAGGGGTTGAAAATGAGGCAAAGCGTCTCTTCTCTCTTCCCTCTGAGCAGAAGTTGAAGGCCCTTAGATCTCCCGGTGGTGCCACTGGCTATGGCAGAGCAAGGATATCACCATTCTTCCCAAAGTTCATGTGGCATGAAGGATTTACCATCATTGGTTCTCCCTCTCATGATGCCAAAAAGATATGGCCTAATGATTATGCACGGTTTTGTGATTTGATGGAGAATTATGAGAAGCAGATGAAGTTTATAGCAGAGCGACTAACAGAGATGATGTTGGAGATGTTGGAGATAAGTGAGGAGAAAAGAGAATGGGTTGGTGGAAGCAACATTTGTGGTGCGGTTCAGTTGAATTTCTACCCGACATGTCCCGAACCGAACCGAGCCATGGGTTTAGCCCCTCACACCGACACCTCTCTCTTCACAATCTTACACCAAAGCCAAACCACAGGTCTTCAAATATTTAGGGAAGAAAATGGGTGGGTTCCAGTGCAACCACACCCTAACGCCCTGGTCGTTAACACAGGCGATCTCTTACACATCATTTCCAATGCAAGGTTTCGATGTGCTCTTCACCGCGTCACTGTGAATAGGACCTTCCAACGTTACTCTGTGGCTTATTTCTACTCTCCACCCATTGATTATCTGCTTTCTCCTATGCCCACTTCATATCTCAACTCTGTTCAACGTTTTCGTCCTGTCACTGTAAAAGAGTACATTGGAATTAAGGCCAAGAATCTTGGAGAAGCACTTTCTTTCATTAGTATTTAA 1041 0.44 METLSEAYREHPLHLRHIIPLDFSSVLSLPDSHSWSLSQDNDYFSFKDTSSSSIPIIDLMDPNAKELIGLACEQWGAFQIKNHGIPLSVIEGVENEAKRLFSLPSEQKLKALRSPGGATGYGRARISPFFPKFMWHEGFTIIGSPSHDAKKIWPNDYARFCDLMENYEKQMKFIAERLTEMMLEMLEISEEKREWVGGSNICGAVQLNFYPTCPEPNRAMGLAPHTDTSLFTILHQSQTTGLQIFREENGWVPVQPHPNALVVNTGDLLHIISNARFRCALHRVTVNRTFQRYSVAYFYSPPIDYLLSPMPTSYLNSVQRFRPVTVKEYIGIKAKNLGEALSFISI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1218 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 301 IPR005123 -
Apr5g1218 346 SUPERFAMILY Clavaminate synthase-like 18 337 - -
Apr5g1218 346 Coils Coil 164 184 - -
Apr5g1218 346 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 11 340 - -
Apr5g1218 346 Pfam 2OG-Fe(II) oxygenase superfamily 205 301 IPR044861 -
Apr5g1218 346 Gene3D - 21 337 IPR027443 -
Apr5g1218 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 154 IPR026992 -
Apr5g1218 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1218 Apr-Chr5 16638931 16640570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1218 47 329 Glycosyltransferase AT5G59530 30.492 4.69e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1218 K04124 - gmx:100818754 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1218 5 16638931 16640570 Apr9g0148 9 1758505 1760432 PCT