Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0144 ATGCTCAAGCAAATCCTCAGCAAGCTTCCTCGAAAATCGTTGAAACCTGACTCGGACGAGTCAACTCGGGGTGACTCGTCGCATTCCACCTATTCGCCACGCGCCTCTGGCAGAAGCCACAGACCTCACGGGGGCGGATGTTCAACATCAGCCGCCCTGAAGCGAGCTTCGTCGTCAGCAGTGTTTCCGGCGAGCATGGTGTCTGGGATTGAACCTTTGGTGCCGTTTAAGGATGTTCCTAACGCTGAGAAGATGAACCTGTTTGTGAGCAAGTTGAGCCTTTGTTGTGTCACGTTTGATTTCACAGACCCTGGTAAGAACATTGCGGATAAAGATGTGAAAAGGAAGACTTTGGTTGAACTTGTTGATTTTGTGGCTTGTGGGTCAATGAAGTTTAGTGAGCCTGCTATCCTTGCTATGTGTAGAATGTGTGCTATTAATCTGTTTAGAGTTTTTCCTCCTAATTATAGGGCTAATGGTGGTGGTGGTGAGAATGATGATGACGAACCTATGTTTGATCCCGCTTGGCCGCATTTGCAACTTGTGTATGAATTGCTGCTTAAATTTATCTCTTCTTCGAGCCTCGATGCTAAGGTAGCAAAAAAGTATATTGATCATTCGTTTATTTCGAGGTTGCTTGAATTATTTGATTCAGAGGATCCTAGGGAAAGGGATTGCTTGAAGACAATTCTGCATAGGATTTATGGGAAGTTCATGGTGCATAGACCATATATTCGAAAATCTATGAACAATATATTTTATCGGTTTGTGTTTGAGACTGAGAAGCACAATGGGATTGCTGAGTTGTTGGAGATTTTTGGGAGTGTAATTAGTGGGTTTGCTTTGCCGTTGAAAGAGGAACACAAAATCTTCTTGTGGCGAGTTTTAGTCCCCTTGCACAAACCGAAATCTATGGGGGTGTACTTTCAACAATTGGCTTACTGTGTTATGCAATTTATAGATAAGGAACCAAAGTTAGCGAGCATTGTGATTAGGGGTTTGTTGAAGTATTGGCCGGCAACAAATAGTCAAAAAGAGGTGATGTTTCTGGGTGAACTCGAAGAAATTTTGGAAGTAATTAACATGGTAGAGTTCCAGAGGGTCATGGTCCCATTGTTTTGGCGAATTGGATGCTGCATTAACAGTTTACACTTTCAGGTAGCTGAAAGGGCCCTATTCTTATGGAACAATGATCACATTGTCAATTTGATTGCTCATAACCGTCAAGTGATCCTGCCCATCATATTTCCAGCTTTAGACAGGAATGTTCAATGCCATTGGAACCCAGCAGTTGTCAACTTGACTCACAATATCAGAAAGATGTTCTTGGAGATGGATGAGAAGCTCTTCATTTCTTGTCATAATCACTTTAAGGAAGAAGAAGCAATCATAATCACAGCGGCTGAGAAGCGAAAGGAGGCGTGGAAACAACTTGAGCATGCAGCCAGTCTCAGGCCTGTCATTGGAAACACAGCTGTTTTAGTGTCCTGA 1491 0.4306 MLKQILSKLPRKSLKPDSDESTRGDSSHSTYSPRASGRSHRPHGGGCSTSAALKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKNIADKDVKRKTLVELVDFVACGSMKFSEPAILAMCRMCAINLFRVFPPNYRANGGGGENDDDEPMFDPAWPHLQLVYELLLKFISSSSLDAKVAKKYIDHSFISRLLELFDSEDPRERDCLKTILHRIYGKFMVHRPYIRKSMNNIFYRFVFETEKHNGIAELLEIFGSVISGFALPLKEEHKIFLWRVLVPLHKPKSMGVYFQQLAYCVMQFIDKEPKLASIVIRGLLKYWPATNSQKEVMFLGELEEILEVINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALDRNVQCHWNPAVVNLTHNIRKMFLEMDEKLFISCHNHFKEEEAIIITAAEKRKEAWKQLEHAASLRPVIGNTAVLVS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0144 496 Gene3D - 80 481 IPR011989 -
Apr9g0144 496 SUPERFAMILY ARM repeat 86 478 IPR016024 -
Apr9g0144 496 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 75 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr9g0144 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 496 - -
Apr9g0144 496 MobiDBLite consensus disorder prediction 10 24 - -
Apr9g0144 496 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 496 IPR002554 GO:0000159|GO:0007165|GO:0019888
Apr9g0144 496 MobiDBLite consensus disorder prediction 1 50 - -
Apr9g0144 496 PIRSF PP2A_B56 4 493 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0144 Apr-Chr9 1714591 1718440 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0144 K11584 - gmx:100781390 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0144 9 1714591 1718440 Apr9g0144 9 1714591 1718440 ECH
Apr5g1215 5 16610303 16613429 Apr9g0144 9 1714591 1718440 ECH
Apr9g0144 9 1714591 1718440 Apr5g1215 5 16610303 16613429 PCT