Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0103 ATGCAACCCCAGCTGAGCTCGAGAATTGATTTGGTTGAATTGAAAGCACAAATTGTGAAGAGGATTGGAGCAGATAAGTCGAAGCAGTACTTTCATTACTTAAACAGGTTTCTGAGTCAGAAGCTGAGAAAGAATGAATTTGATAAGTTATGTTGTCGGGTACTCGGGAGGGAGAATCTTACATTACACAATCACTTTATAAAGTCAATTTTGAAGAATGCGTGCCAAGCCAAGACACCACCGCCAATCCAGCCGACGGGTCCTCCGAAATCAGGAGCATTTGTCAATCATGTATCTCCTGGTGAAGATGATGGACATGAGCAGAGTGTTGCTAACTCCCAAAATCAAAATGCTTCCATTTGGTCCAATGGAGTTTTGCCAGTGTCCCCACGTAAGTTAAGGTCTGGAGTGCGTGATCGGAAGCTTAAAGATAGACCAAGCCCTCTTGGACCAAATGGGAAAGTTGATTCTGTTGTTCATCAATCCACGGCTACTGAAGACAGTGGTAGTAAGGTTGATATTGAAAATGGAACTCTTACACCGTGTGATTATCAGAGACCAATCCAGCATCTTCAAGCAGTTGCTGAACTACCTGAGAATGGTATGAGGGATGTTATTCAGAGACCAGAAAAACCAAGAATACTTGGCAAAGGGCCAACTGAAATATCAGTTGTTGAGGATGGGGAAGAGGTAGAGCAATTAAACTGGCTAAGCTTTTCTAGAAGCCCCCTGATAGCACCACTTGGGATTCCTTACTGCCCTGCAAGTGTTGGTGGGGCCCGCAAAGCATTGCCAGTGAATAGCACTAGTGATTTTGTTAGTTGTAGTGACAGTGGTAGGTTATCTGATACTGATACATTGAGAAGGCGCATGGAGCAGATTGCCACAATACAGGGTCTTGGAGGTGTTTCTATGGAATGTGCAAATGTGTTGAATAATGTCTTAGATGTGTACTTGAAACGGCTGATCAGGTCTTGTGTTGATTTAGTAGGGGCTAGGTCTGCAAATGAGCAGAGGAAGCTCCCTGTCTCGAAACAGCAGAGTCAGGGCAAGGTCATTAATGGCATGTGGCCAAATAATCATTTACAAGCACAGGGTGCTGGTGGGCTGGCAGAACCTGAGCCTGAACACAGACCACCGTTATCAGTCTCTTTACATGATTTTAAAGTTGCTATGGAGCTAAATCCAAAGCAACTTGGGGAAGACTGGCCACTGCAGTTGGAGAAAATTTCTATGCGATCATTTGAAGAATAA 1254 0.441 MQPQLSSRIDLVELKAQIVKRIGADKSKQYFHYLNRFLSQKLRKNEFDKLCCRVLGRENLTLHNHFIKSILKNACQAKTPPPIQPTGPPKSGAFVNHVSPGEDDGHEQSVANSQNQNASIWSNGVLPVSPRKLRSGVRDRKLKDRPSPLGPNGKVDSVVHQSTATEDSGSKVDIENGTLTPCDYQRPIQHLQAVAELPENGMRDVIQRPEKPRILGKGPTEISVVEDGEEVEQLNWLSFSRSPLIAPLGIPYCPASVGGARKALPVNSTSDFVSCSDSGRLSDTDTLRRRMEQIATIQGLGGVSMECANVLNNVLDVYLKRLIRSCVDLVGARSANEQRKLPVSKQQSQGKVINGMWPNNHLQAQGAGGLAEPEPEHRPPLSVSLHDFKVAMELNPKQLGEDWPLQLEKISMRSFEE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0103 417 MobiDBLite consensus disorder prediction 78 174 - -
Apr9g0103 417 MobiDBLite consensus disorder prediction 133 147 - -
Apr9g0103 417 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 330 IPR024738 GO:0070461
Apr9g0103 417 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 417 IPR024738 GO:0070461
Apr9g0103 417 MobiDBLite consensus disorder prediction 106 124 - -
Apr9g0103 417 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 417 - -
Apr9g0103 417 MobiDBLite consensus disorder prediction 156 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0103 Apr-Chr9 1255308 1258098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0103 - - gmx:100811524 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0103 9 1255308 1258098 Apr9g0103 9 1255308 1258098 ECH
Apr9g0103 9 1255308 1258098 Apr5g1182 5 16279926 16282731 PCT