Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1182 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAGAGCACAAATAGTAAAGAAGCTTGGAGCGGATAAGTCAAAGCGGTACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAACTGAGCAAGACTGAATTTGATAGGTTGTGTTTTCGAGTACTTGGGAGGGAGAATCTTCAATTGCACAACCATTTTATAAAGTCAATTTTGAAGAATGCCTGCGAAGCCAAGACCCCACCACCAATCCTGCCATCAGGTCCTCCAAAGTCTGGTGAACATGGTACAGACATATCTCCTGGTAGAGAAGACGGGCATGAACAGAGTGTTGCCAGCTCCCAAAATCAAAAGGCCCACATTTGGTCAAATGGGGTTTTGCCGGCATCCCCAGGTAAGGTTAGGTCTGGAATACGGGATCGGAAGCTGAGAGATAGACCAAGCCCTCTCGGACCAAATGGGAAGGTTGATTCTGTTTCTCACCAATCAATGGGTACAGAAGACAGTGGTAGTAAGGTCGATATGGAGAATGGAATTCTTACTCCATGTGATTATCAGAGACCGACACAGCATCTTCAAGCTGTTGCTGAGCTACCTGAGAGTGAAAGAGGAGATTATATTCATCGACCTGCAGATAAACCAAGAATGCACGGTAAAGGGCCAGCTGGAAGGTCAATTGTTGAAGATGGGGAAGAGGTAGATCAGTTAAACCGCCTGGGTTTCTCTAGAAGTCCCTTGATGGCACCACTTGGGATTCCTTACTGCTCAGCAAGTGTAGGGGGAGCCCGCAAAGCATTGCCAGTGGGTAATGCTGGTGATTTTGATAGTTATTGTGACAGTGGTAGGTTGTCTGATACAGATACTCTGCGAAGACGCATGGAGCAGATTGCTACAGTACAAGGTCTTGGAGGTGTTTCTATGGAATGTGCCAATATGTTGAATAATATGTTGGATGTGTACTTGAAACGGTTGATCAGGTCTTGTGTTGAATTAGTTGGAGCTAGATCTACAAATGAGCCAAGGAAGCCCCCTGCCCCCAAACAGCAGATACAGGGTAAGATCATCAATGGTATGTGGCCAAGTAATCATTTACATGTTCAGAGTACTGGTGGATCAGCAGAACCTGTGCCTGAGCACAGACCGCCTTGCTCAGTTTCTTTGCATGATTTTAGAGTTGCCATGGAGCTAAATCCACGGCAACTTGGAGAAGATTGGCCACTGCTGTTGGAGAAAATATCCATGAAATCATTTGAGGAATAA 1257 0.4535 MQPQQSSRIDLGELRAQIVKKLGADKSKRYFYYLNRFLSQKLSKTEFDRLCFRVLGRENLQLHNHFIKSILKNACEAKTPPPILPSGPPKSGEHGTDISPGREDGHEQSVASSQNQKAHIWSNGVLPASPGKVRSGIRDRKLRDRPSPLGPNGKVDSVSHQSMGTEDSGSKVDMENGILTPCDYQRPTQHLQAVAELPESERGDYIHRPADKPRMHGKGPAGRSIVEDGEEVDQLNRLGFSRSPLMAPLGIPYCSASVGGARKALPVGNAGDFDSYCDSGRLSDTDTLRRRMEQIATVQGLGGVSMECANMLNNMLDVYLKRLIRSCVELVGARSTNEPRKPPAPKQQIQGKIINGMWPSNHLHVQSTGGSAEPVPEHRPPCSVSLHDFRVAMELNPRQLGEDWPLLLEKISMKSFEE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1182 418 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 331 IPR024738 GO:0070461
Apr5g1182 418 MobiDBLite consensus disorder prediction 78 173 - -
Apr5g1182 418 MobiDBLite consensus disorder prediction 154 169 - -
Apr5g1182 418 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 418 - -
Apr5g1182 418 MobiDBLite consensus disorder prediction 106 122 - -
Apr5g1182 418 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 418 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1182 Apr-Chr5 16279926 16282731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1182 - - gmx:100819343 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0103 9 1255308 1258098 Apr5g1182 5 16279926 16282731 PCT