Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0060 ATGGCAGTATCAAACCCAGAAGAAGAAGAGATCGAGTTCAAGTGGGGCAAGAAAAGAGGAATCGGTGGTAAAAAGAAGGACGTGCAGTTCTACGAGTCGTTCACCTACGACGGGGACGATTACACACTATACGACGTCGTTTATCTTCACGCTGAAGGCGTGGCTGAGCCTTACATTGGAAAACTGATAAAGATTTGGGAGAATCGTGATAAGTCGAAGAAAGTGAAGGTTCACTGGTTTTTTCGTCCCAGCGATATTCGACCCTTCGTGGAAGGTATCGAAATGATGGAGAACGAGTTGTTCTTGGCGTGCGGTGAAGGCACGGGCCTCGCCAATGTTAATCCTTTGGAAGCTGTTGCTGGAAAATGCAATGTTGTTTGCATTTCTAAGGACAGCAGGAATCCACAACCATCAGATGAAGCACTTCAAATGGCTGATTATGTATTCTATCGTTTCTTTGATGTTGGGAATCGTAAAATTTTGGGTGAAATAGATGACATGATTGCTGGAATCCCAGTTAAAAATATATTTAACAAGTGA 540 0.4333 MAVSNPEEEEIEFKWGKKRGIGGKKKDVQFYESFTYDGDDYTLYDVVYLHAEGVAEPYIGKLIKIWENRDKSKKVKVHWFFRPSDIRPFVEGIEMMENELFLACGEGTGLANVNPLEAVAGKCNVVCISKDSRNPQPSDEALQMADYVFYRFFDVGNRKILGEIDDMIAGIPVKNIFNK* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0060 179 Pfam BAH domain 41 129 IPR001025 GO:0003682
Apr9g0060 179 Gene3D - 8 161 IPR043151 -
Apr9g0060 179 ProSiteProfiles BAH domain profile. 39 164 IPR001025 GO:0003682
Apr9g0060 179 PANTHER PROTEIN ANTI-SILENCING 1 4 179 - -
Apr9g0060 179 PANTHER PROTEIN ANTI-SILENCING 1 4 179 - -
Apr9g0060 179 SMART BAH_4 39 165 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0060 Apr-Chr9 805933 814401 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0060 - - aprc:113865076 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0060 9 805933 814401 Apr9g0060 9 805933 814401 ECH
Apr5g1142 5 16006751 16020961 Apr9g0060 9 805933 814401 ECH