Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2428 ATGAAATGCAAAGCCAAGAGTTCCAAACTGAAGTTGGGTATACCCATTTTCTTCTTCCTTTGCGCCCTTTTCTTCTTTGTTGGGCTCTTTGTGCCTCCTTTCTTCTTTCAGGATTTGGGTTACGATAGACCACAGTCCAGAATACTCCAAGAATCGGTGAAGAAAGAATATGACGTTCTTGAGCATGGTAAATCTGGGGAACCCGTTGTTGATCCAATCCCATTTCAGATTTTAAGTTGGAGACCACGGGTGGTTTACTATCCAAACTTCACAACTGCGGAAGTATGTCAGCAAATAATTGAAATGGCAAAGCCAAAACTTGAACCGTCAAAACTGGCTTTGCGGAAAGGAGAAACTGCTGAGAGCACAAAAGGCACTAGAACAAGTTCAGGTACATTCATCAGTGCATCAGAAGATAAATCTGGCATCTTAGACTTCATTGAGAGAAAAATTGCAAAGGTTACGATGATTCCTAGGACCCATGGAGAAGACTTCAATGTATTGAGGTATGAGGTTGGCCAGAAATATGATTCTCATTATGATGCATTCAACCCAGCTGAATATGGCACTGTTCAGAGCCAAAGGATTGCTTCCTATTTGTTATACCTATCAAATGTAGAAGCAGGAGGAGAAACAATGTTCCCTTTTGAGGATGGTTTGAATATGGATATAGGTTATGACTACCAAAAATGCATTGGTTTGAAGGTGACACCACGGCAAGGTGATGGACTTCTATTTTATTCACTGTTTCCAAATGGGAAAATTGATAAGACATCTCTTCATGGAAGTTGTCCTGTGATTAAGGGGGAGAAATGGGTTGCAACAAAGTGGATTAATGATCAAGAGCAAATTACTAGTTTTCCTTCTAAGGAGTTTGCATTCATGTGA 888 0.4032 MKCKAKSSKLKLGIPIFFFLCALFFFVGLFVPPFFFQDLGYDRPQSRILQESVKKEYDVLEHGKSGEPVVDPIPFQILSWRPRVVYYPNFTTAEVCQQIIEMAKPKLEPSKLALRKGETAESTKGTRTSSGTFISASEDKSGILDFIERKIAKVTMIPRTHGEDFNVLRYEVGQKYDSHYDAFNPAEYGTVQSQRIASYLLYLSNVEAGGETMFPFEDGLNMDIGYDYQKCIGLKVTPRQGDGLLFYSLFPNGKIDKTSLHGSCPVIKGEKWVATKWINDQEQITSFPSKEFAFM* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2428 295 Pfam 2OG-Fe(II) oxygenase superfamily 165 279 IPR044862 -
Apr8g2428 295 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 8 283 IPR045054 -
Apr8g2428 295 PANTHER TYPE 1 PROLY 4-HYDROXYLASE 8 283 - -
Apr8g2428 295 SMART p4hc 82 279 IPR006620 GO:0005506|GO:0016705|GO:0031418
Apr8g2428 295 Gene3D q2cbj1_9rhob like domain 75 279 - -
Apr8g2428 295 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 280 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2428 Apr-Chr8 34423022 34426713 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2428 K00472 - gmx:100811068 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2428 8 34423022 34426713 Apr8g2428 8 34423022 34426713 ECH
Apr7g0857 7 15592201 15599706 Apr8g2428 8 34423022 34426713 PCT