Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0857 ATGAAAACCAAAGCGGTTAAGGGAAATTGGAGTTTGAGGACGAACAAGTTCGGCTTACCTTCTGTCTTCCTTTTTTGCATCTTCTTCTTTCTCGCTGGATTCTTTGTTTCCACTCTCTTCTCTCACTCTCAGGAACATGAATATGACCTGAGGCTGATGGCGAGACCGAGAGCGAGATTACTTGAAAAATCGACGAAGGAGCAGACAGAGTACGATTTGTTGCAAACTGGAGATTCCGGTGACGATTTTATTACATTGATTCCTTTCCAGGTTTTGAGCTGGTACCCTCGCGCTCTGTATTTTCCTAATTTTGCAAGCACGGAACAATGTGAACGCATAGTTGATATGGCAAAGAGAGGACTCAAACCATCAACTTTGGCGTTACGCAAGGGAGAAACGGAAGAGAATACGAAGGGAATCAGAACAAGCTCTGGTGTGTTCATAAGTGCTTCTGAGGATAAAACAGGAGTTTTAGATGCCATTGAGGAGAAAATTGCCAAAGCAACAAAAATTCCGAGTACTCATGGAGAGTTGGCTTCCTTTTTGCTGTATTTAACTGATGTTCCGGAAGGTGGGAAGACCATGTTTCCGTTTGAGAATGGCTTGAACATGGACGGTAGCTATGGTTACGAGGACTGTATTGGTTTGAGAGTAAGGCCACGCAAGGGGGATGGACTTCTATTTTATTCATTATTCCCTAATGGTACAATTGATCCGACATCGCTCCACGGAAGCTGCCCCGTGCTAAAAGGGGAGAAGTGGGTGGCTACAAAGTGGATAAGGGATCAAGTACAGAACGATTAG 804 0.4428 MKTKAVKGNWSLRTNKFGLPSVFLFCIFFFLAGFFVSTLFSHSQEHEYDLRLMARPRARLLEKSTKEQTEYDLLQTGDSGDDFITLIPFQVLSWYPRALYFPNFASTEQCERIVDMAKRGLKPSTLALRKGETEENTKGIRTSSGVFISASEDKTGVLDAIEEKIAKATKIPSTHGELASFLLYLTDVPEGGKTMFPFENGLNMDGSYGYEDCIGLRVRPRKGDGLLFYSLFPNGTIDPTSLHGSCPVLKGEKWVATKWIRDQVQND* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0857 267 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 178 266 IPR045054 -
Apr7g0857 267 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 8 177 IPR045054 -
Apr7g0857 267 PANTHER TYPE 1 PROLY 4-HYDROXYLASE 8 177 - -
Apr7g0857 267 PANTHER TYPE 1 PROLY 4-HYDROXYLASE 178 266 - -
Apr7g0857 267 Gene3D q2cbj1_9rhob like domain 177 261 - -
Apr7g0857 267 Gene3D q2cbj1_9rhob like domain 89 176 - -
Apr7g0857 267 SMART p4hc 96 261 IPR006620 GO:0005506|GO:0016705|GO:0031418
Apr7g0857 267 Pfam 2OG-Fe(II) oxygenase superfamily 175 261 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0857 Apr-Chr7 15592201 15599706 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0857 K00472 - gmx:100811904 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0857 7 15592201 15599706 Apr7g0857 7 15592201 15599706 ECH
Apr7g0857 7 15592201 15599706 Apr8g2428 8 34423022 34426713 PCT