Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2251 ATGGCAGTGGAATGCATAACAAGCACACACTCCATGCCCATGCTTCAACCACCAAATCAAGAAAGCAAAGAACAAGAACCACCATTGGTTTTTGATGCCTCTGTTCTTAGACACCAACTTAACATACCAACCCAATTCGTTTGGCCTGACGAAGAGAAAGCCAAGTTGGATGTACCCGAACTGGTGGTCCCATTCATTGACTTGGGAGGGTTTCTCTCAGGTGACCCAATTGCCGCAATGGAAGCCTCAAGGCTTGTTGGTGAAGCATGTCAAAAGCATGGCTTCTTTCTTGTTGTCAATCATGGGATTGACAAACACCTCATCTCTCATGCTCACCTTTACATGGATCACTTCTTTGACCTTCCCCTGTCTCAGAAACAGAGGGCTCAGAGGAAAGCAGGGGAGCACTGTGGTTATGCTAGTAGCTTCACTGGCAGGTTCTCCTCCAAGCTTCCATGGAAAGAGACACTTTCTTTTCAGTACTCAGCTGATAAAGACTCCTCAAACCTTGTCAAAGACTACTTGTGCCATAAAATGGGCAAGGAGTTTGAGCAATTTGGGAAGGTTTACCAGGACTACTGTGAAGCCATGAGCAATCTTTCTTTGGGTATAATGGAGCTTCTTGGAATGAGCCTTGGAGTTGGTAAAGCATATTTTAGGGAGTTCTTTGAAGGGAACAGTTCAATAATGAGACTGAATTACTACCCTCCTTGTCAAAAACCTGACCTCACTTTAGGCACTGGACCTCATTGTGATCCAACATCTTTGACCATTCTTCACCAAGACCAAGTGGGTGGCCTGCAAGTTTGTGTTGACAATGAGTGGCATTCCATTAGCCCGGATTTCAATGCTTTTGTAGTCAATATTGGAGATACCTTCATGGCTCTTTCAAATGGGAGATACAAGAGTTGCTTGCATAGGGCAGTGGTGAACAGCAAGACAACAAGAAAATCTCTTGCTTTCTTTTTGTGTCCAAGAAGTGACAAGGTGGTAAGTCCACCATGTGAATTAGTGGACAATTTGAGCCCAAGGCTATACCCAGATTTTACGTGGCCCATGCTGCTTGAGTTTACTCAAAAGCATTACAGAGCTGACATGAAAACCCTTGAAGCATTTGCCAACTGGCTTCAATGGAAAAGTAACTAA 1146 0.4424 MAVECITSTHSMPMLQPPNQESKEQEPPLVFDASVLRHQLNIPTQFVWPDEEKAKLDVPELVVPFIDLGGFLSGDPIAAMEASRLVGEACQKHGFFLVVNHGIDKHLISHAHLYMDHFFDLPLSQKQRAQRKAGEHCGYASSFTGRFSSKLPWKETLSFQYSADKDSSNLVKDYLCHKMGKEFEQFGKVYQDYCEAMSNLSLGIMELLGMSLGVGKAYFREFFEGNSSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVCVDNEWHSISPDFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSKTTRKSLAFFLCPRSDKVVSPPCELVDNLSPRLYPDFTWPMLLEFTQKHYRADMKTLEAFANWLQWKSN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2251 381 Pfam 2OG-Fe(II) oxygenase superfamily 228 325 IPR044861 -
Apr8g2251 381 Gene3D - 34 364 IPR027443 -
Apr8g2251 381 MobiDBLite consensus disorder prediction 1 25 - -
Apr8g2251 381 MobiDBLite consensus disorder prediction 9 23 - -
Apr8g2251 381 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 19 378 - -
Apr8g2251 381 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 19 378 - -
Apr8g2251 381 PRINTS Isopenicillin N synthase signature 86 103 - -
Apr8g2251 381 PRINTS Isopenicillin N synthase signature 250 271 - -
Apr8g2251 381 PRINTS Isopenicillin N synthase signature 285 311 - -
Apr8g2251 381 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 168 IPR026992 -
Apr8g2251 381 SUPERFAMILY Clavaminate synthase-like 36 365 - -
Apr8g2251 381 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 226 325 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2251 Apr-Chr8 32959760 32961093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2251 45 375 Glycosyltransferase AT5G59530 27.647 1.81e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2251 K05282 - gmx:100816992 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0775 6 12098272 12100086 Apr8g2251 8 32959760 32961093 PCT