Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2247 ATGGCCCAGTTTACCCCCTCAGGTAAATCTGATCATCCCTTAAAAGAAGACTGCAAGAAAACAAGTGCACTGGTTGTTTGCTTTGGTGAGATGTTAATAGACTTCGTGCCAACAGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCAAATGTGGCTGTTGGCATCTCTAGGCTTGGGGGTTCATCTGCTTTTATAGGAAAGGTTGGAGCAGATGAATTTGGATATATGTTGGCTGATATTTTAAAGCAGAACAAGGTTGAGACATCTGGCTTGCAGTATGACTCAAATGCAAGAACTGCATTAGCTTTTGTTACCCTAAGAGCTGATGGCGAGCGTGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTTCATGAGTCAGAGCTTGATAAAAATCTCATAAAGCAGGCTAAAATATTCCATTATGGTTCCATCAGCTTGATTAATGAGCCGTGCAAGTCAGCTCATCTTGCTGCCATGAGAATTGCCAAAGACTCCGGTTGCATTCTCTCTTATGATCCAAACTTGAGATTGGCATTATGGCCATCAGCTGAGGCGGCCCGGAATGGCATAATGAGTATATGGAATCAAGCCGACATCATAAAGATAAGTGAGGATGAGATTACTTTTTTGACTGGTGGTCATGATCCTTATGATGATAATGTTGTATTAAAGCATCTTTTCCACCGTAATCTCAAGCTTTTAATTGTCACTGAAGGGTCAGAGGGTTGTAGATATTACACCAAGGAATTTAGAGGCAGGGTTGCAGGTGTGAAAGTCAACCCTGTTGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGGATTATCTACAACTTAGCTTCTGACCGAAGCCTTTTCCAGAATGAGGAGCGTCTGAGAGAAGCTCTATATTTTGCCAACGTATGTGGTGCCATAACTGTAACAGACAGAGGGGCAATTCCTGCACTACCTACAAAAGAAGCGGTCCTGCAATTCAGTGCAAAATAG 1026 0.4327 MAQFTPSGKSDHPLKEDCKKTSALVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGADEFGYMLADILKQNKVETSGLQYDSNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDKNLIKQAKIFHYGSISLINEPCKSAHLAAMRIAKDSGCILSYDPNLRLALWPSAEAARNGIMSIWNQADIIKISEDEITFLTGGHDPYDDNVVLKHLFHRNLKLLIVTEGSEGCRYYTKEFRGRVAGVKVNPVDTTGAGDAFVSGIIYNLASDRSLFQNEERLREALYFANVCGAITVTDRGAIPALPTKEAVLQFSAK* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2247 341 CDD bac_FRK 24 326 - -
Apr8g2247 341 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Apr8g2247 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Apr8g2247 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Apr8g2247 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Apr8g2247 341 PANTHER FRUCTOKINASE-7-RELATED 16 339 - -
Apr8g2247 341 Gene3D - 21 341 IPR029056 -
Apr8g2247 341 PANTHER HEXOKINASE FAMILY MEMBER 16 339 - -
Apr8g2247 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Apr8g2247 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Apr8g2247 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2247 Apr-Chr8 32908470 32911595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2247 K00847 - gmx:100818404 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0773 6 12049404 12053941 Apr8g2247 8 32908470 32911595 PCT