Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0773 ATGGCTCTCTCTACCTCATCAGGTCAATCCAATGATTTCACAAAAGAAGACACCAAGGAAACGAGTTCTCTTGTTGTTTGCTTTGGGGAAATGTTAATAGACTTTGTCCCAACTGTGGGAGGAGTGTCACTGGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGAGCTCCAGCCAACGTGGCTGTGGGTATCTCTAGACTGGGAGGTTCATCTGCTTTTGTAGGAAAGGTTGGAGCAGATGAATTTGGGTACATGTTGGCTGACATTTTAAAGCATAACAACGTTGAGACATCTGGCTTGCGGTTTGACACTAATGCAAGAACTGCGTTAGCTTTTGTTACACTTAGAGCTGATGGTGAGCGTGAGTTCTTGTTTTTCCGGAATCCAAGTGCTGATATGCTTCTTCATGAGTCAGAACTTGACAAAAATCTCATAAAGCAGGCTAGAATATTCCATTATGGCTCCATCAGCTTGATTGATGAGCCATGCAAGTCAGCTCACCTTGCTGCTATGAGCACTGCCAAAAACTCTGGTTGCATACTCTCTTATGATCCTAATTTGAGATTGGCACTGTGGCCTTCAGCAGAGGCTGCTCGGAAAGGCATAATGGATATATGGGATCAGGCTGATGTTATAAAGATAAGTGAAGATGAGATTACATTTTTGACCGGAGGTGATGATCCTTGTGATGATAATGTTGTTTTGAAGAAACTTTTTCATCCAAATCTCAAGCTTTTAATAGTTACTGAAGGCTCGGAGGGTTGCAGATATTACACCAAGGAATTTAGGGGCAGGGTTGCAGGTGTTAAAGTTAAACCCGTGGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGGATTTTATACTGTATAGCTTCTGACCAAGCTATTTTTCAGGATGAGAAACGTCTCCGAAAGGCTTTATATTTTGCTAATGTATGTGGTGCTATCACTGTTACTGAAAGAGGTGCAATTCCTGCACTACCCACAAAGGAAGCTATCTTGCAATTCTTACTAGAGGCAGCTGCAATATAA 1038 0.4268 MALSTSSGQSNDFTKEDTKETSSLVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKVGADEFGYMLADILKHNNVETSGLRFDTNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDKNLIKQARIFHYGSISLIDEPCKSAHLAAMSTAKNSGCILSYDPNLRLALWPSAEAARKGIMDIWDQADVIKISEDEITFLTGGDDPCDDNVVLKKLFHPNLKLLIVTEGSEGCRYYTKEFRGRVAGVKVKPVDTTGAGDAFVSGILYCIASDQAIFQDEKRLRKALYFANVCGAITVTERGAIPALPTKEAILQFLLEAAAI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0773 345 CDD bac_FRK 24 326 - -
Apr6g0773 345 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Apr6g0773 345 Gene3D - 21 344 IPR029056 -
Apr6g0773 345 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Apr6g0773 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Apr6g0773 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Apr6g0773 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Apr6g0773 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Apr6g0773 345 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Apr6g0773 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Apr6g0773 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0773 Apr-Chr6 12049404 12053941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0773 K00847 - gmx:100778752 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0773 6 12049404 12053941 Apr6g0773 6 12049404 12053941 ECH
Apr6g0773 6 12049404 12053941 Apr8g2247 8 32908470 32911595 PCT