Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2169 ATGGCACTGGCTTCTGTTGCAAAAGTTGTCCTTGGTTTAATTGCATTTGCAATCTTCTGGGTATTAGCAGTTTTCCCAGCTGTGCCTTTTCTACCCATTGGTAGAACTGCAGGGTCCCTTCTTGGTGCAATGCTTATGGTCTTGTTTCAAGTTATTACTCCAGATGAAGCTTATGCCACAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGGACAATGGTGGTGAGCGTGTATCTTGAAAGAGCAGACATGTTTAAATACATAGGGAAGTTGCTCGCTTGGAAGAGTAGAGGAGCAAAGGACTTGCTTTGTCGAATATGTATTATCTCTGCTGTCTCAAGTGCTCTTTTCACAAATGACACTTCTTGTGTTGTTTTGACTGAATTCATATTGAAAATTGCGAGGCAGCACAACCTCCCACCAACTCCTTTCCTACTTGCCCTTGCTTCCAGTGCTAATATAGGGTCCTCAGCCACTCCAATTGGCAACCCCCAAAACCTGGTTATAGCTGTTCAGAGTAAAATCTCATTTGGGAATTTTCTGATTGGTGTTCTTCCAGCTATGGTGGCTGGAGTTATAGCCAATGCTTTAATTCTTCTAATCATGTATTGGAAGTTGTTGTCTATTCATAAGGATGAAGAAGATGCTGGTGCAGAAGTTGCAGCTGAAGATGAATTTGATTCCCATCGATTTTCACCAGCCACTATGTCTCATTTTTCGTCCTTAAATTCTCAAGAGTGGAATTCCAATCTTGAATCTATTAATATTCAGAACTCTCCTCAAGCTCAAATTCTAAGAAACCGAGCTACTGCAACTGCAACTGAAATTCTTGGTGTTCCTAGCAGCACATTTGATTCTGCAAGAATCTCAAATGTATCAAAGGAGGGATCAAATGGTGTGCCATCTCTGACAAAAGAGGAAACTAGCCCTTCGGTTACTTCAGCAGCAGCAGATACACTTATGCCCTCTTCAGAAAGAAAAAACAATTTTATCATAAAGTGGAAAAGGGTATTGTGGAAATCTGGAGTTTATGCCATCACATTAGGAATGTTGGTTGCTTTACTTCTAGGTTTAAATATGTCATGGACTGCAATTACTGCTGCGCTTGCTCTAGTGGTTCTTGATTTCAAAGATGCTAGACCGTGCTTAGAGAAGGTTTCATATTCACTTTTGATATTCTTTTGTGGAATGTTTATCACAGTAGATGGCCTCAATAAAACTGGAATTCCTAGTGCTCTGTGGGACTTGATGGAGCCCTATTCTCATGTTGATCGCGCTAGTGGAATTGCAGTGCTTGCAATTGTCATACTTGTCCTGTCAAATTTGGCTTCAAATGTACCAACAGTTCTCTTGCTTGGAGGACGGGTAGCAGCCTCAGCTGCTGCAATTTCGAAAGCTGATGAGAAGAAGGCATGGCTGATCTTAGCTTGGGCGAGCACAATATCAGGGAATCTCTCACTGTTGGGTTCAGCTGCTAACTTGATAGTGTGTGAACAGGCTCGCCGAGCTCCAAACCTACCATACACTTTAACCTTCTGGAGTCATCTGAAATTTGGCCTTCCTTCTACTATCATAGTCACTGCTATTGGTTTGGCACTCATAAGATGA 1608 0.4179 MALASVAKVVLGLIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVLFQVITPDEAYATIDLPILGLLFGTMVVSVYLERADMFKYIGKLLAWKSRGAKDLLCRICIISAVSSALFTNDTSCVVLTEFILKIARQHNLPPTPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGNFLIGVLPAMVAGVIANALILLIMYWKLLSIHKDEEDAGAEVAAEDEFDSHRFSPATMSHFSSLNSQEWNSNLESINIQNSPQAQILRNRATATATEILGVPSSTFDSARISNVSKEGSNGVPSLTKEETSPSVTSAAADTLMPSSERKNNFIIKWKRVLWKSGVYAITLGMLVALLLGLNMSWTAITAALALVVLDFKDARPCLEKVSYSLLIFFCGMFITVDGLNKTGIPSALWDLMEPYSHVDRASGIAVLAIVILVLSNLASNVPTVLLLGGRVAASAAAISKADEKKAWLILAWASTISGNLSLLGSAANLIVCEQARRAPNLPYTLTFWSHLKFGLPSTIIVTAIGLALIR* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2169 535 Pfam Citrate transporter 27 481 IPR004680 GO:0016021|GO:0055085
Apr8g2169 535 PRINTS Arsenical pump membrane protein signature 109 133 IPR000802 GO:0015105|GO:0015700|GO:0016021
Apr8g2169 535 PRINTS Arsenical pump membrane protein signature 182 205 IPR000802 GO:0015105|GO:0015700|GO:0016021
Apr8g2169 535 CDD YbiR_permease 28 534 - -
Apr8g2169 535 PANTHER TRANSPORTER ARSB-RELATED 1 535 - -
Apr8g2169 535 PANTHER TRANSPORTER ARSB-RELATED 1 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2169 Apr-Chr8 32234163 32240595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2169 - - gmx:100781849 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0677 6 10224836 10237234 Apr8g2169 8 32234163 32240595 PCT
Apr8g2169 8 32234163 32240595 Apr6g0676 6 10182435 10190934 PCT