Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0676 ATGGCACTAGCACCTGTTCCGAAACTCGTGCTTGGTTCAGTTGCATTTGCAATCTTCTGGGTATTAGCAGTTTTCCCTGCTGTGCCTTTTCTACCAATTGGAAGAACTGCAGGGTCATTGCTAGGCGCATTGCTTATGGTTGCATTCCAAGTTCTGAGTCCGGATCAAGCTTATGAAGCAATTGATCTACCAATTCTCGGTCTTCTTTTTGGCACAATGGTTGTTAGTGTTTATCTTGAAAGAGCTGATATGTTCAAATACATAGGGAAATTGCTCTCTTGGAAAAGTAGAGGAGCAAAGGACTTACTTTGTAGAATCTGTTTGATATCTGCGGTTTCAAGTGCTCTTTTCACCAACGACACTTCTTGTGTTGTTTTGACCGAATTCATATTGAAAATTGCAAAGCAGCATAACCTCCCACCTCATCCTTTACTACTTGCACTTGCCACAAGTGCTAATATTGGGTCTGCAGCAACTCCAATTGGCAACCCTCAAAATTTGGTTATTGCTGTTCAAGGGAAAATATCATTTGGAAAGTTTTTATTTGGTGTTCTTCCAGCTATGGTTGTTGGTGTTGTAGTGAATGCGTTGATTCTTATGATTATGTATTGGAGAGTATTATCTATTCAAAAGGATGAAGAGGATCCAGTTGCTGATTTTGAAGCAGAAGAAGAAGTTAATTCTCATCAATTTTCTCCAGCCACAATGTCTCATTATAACTCCTTTAATTCTCAAGAATGGAATGCCCGTATAGATTCTTTTAATATTCACAACTCTCCTCGAGTTCAGAGTTTAAGAAACCGTTCAATGGCAAGTGACGGTGAAATTGACAGGGTTCTTTCTAACAGAATAGATTCTGCAAGAAACTCAAATGCATCAAAGGAGGGGACAAACGATGTGCCTCCTCAGACAAAGGAGGAAACAAATCCAACAAGAACTGATGCAATAGTAGATAGACCGATAGAAGCACGTGTTATGCACACTACAGAAGGAAAGGACTACATAAGCAAGAAATTGAGATATGTACTATGGAAATCATGTGTTTACATAATCACATTGGGAATGTTGGTTGCAATGCTTCTAGGTTTGAATATGTCATGGACTGCTATTGCAGCTGCATTAGCTTTGGTAGTTCTTGATTTCAAAGATGCTATGCCAAGTTTAGAGAAGGTCTCATATTCACTTTTGATATTCTTTTGTGGAATGTTCATCACAGTAGATGGTTTCAATAAAACTGGAATTCCTGGTGCTCTGTGGGACATAATGGAGCCTTATTCTCGAGTAGATCGTGCTAGTGGAGTAGCAATACTTGCTCTAGTTATACTCGTCCTATCAAACGTGGCTTCAAATGTACCAACAGTTCTATTGCTTGGAGGACCAGTGGCAGCCTCAGCTGCTGCAATTTCCAAAGAAGATGAGAAGAAAGCATGGCTGATATTGGCTTGGACCAGCACAGTTGCAGGGAACCTGTCACTGTTGGGATCAGCTGCTAACTTGATCGTGTGCGAACAAGCGCGCCGAGCTCCTAACATTGCATACACATTAACATTCTGGAGCCATTTGAAATTTGGTCTCCCTTCAACTCTTATAATCACTGCAATTGGTTTGGCACTCATAAGATGA 1623 0.4048 MALAPVPKLVLGSVAFAIFWVLAVFPAVPFLPIGRTAGSLLGALLMVAFQVLSPDQAYEAIDLPILGLLFGTMVVSVYLERADMFKYIGKLLSWKSRGAKDLLCRICLISAVSSALFTNDTSCVVLTEFILKIAKQHNLPPHPLLLALATSANIGSAATPIGNPQNLVIAVQGKISFGKFLFGVLPAMVVGVVVNALILMIMYWRVLSIQKDEEDPVADFEAEEEVNSHQFSPATMSHYNSFNSQEWNARIDSFNIHNSPRVQSLRNRSMASDGEIDRVLSNRIDSARNSNASKEGTNDVPPQTKEETNPTRTDAIVDRPIEARVMHTTEGKDYISKKLRYVLWKSCVYIITLGMLVAMLLGLNMSWTAIAAALALVVLDFKDAMPSLEKVSYSLLIFFCGMFITVDGFNKTGIPGALWDIMEPYSRVDRASGVAILALVILVLSNVASNVPTVLLLGGPVAASAAAISKEDEKKAWLILAWTSTVAGNLSLLGSAANLIVCEQARRAPNIAYTLTFWSHLKFGLPSTLIITAIGLALIR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0676 540 PANTHER TRANSPORTER ARSB-RELATED 1 540 - -
Apr6g0676 540 CDD YbiR_permease 28 539 - -
Apr6g0676 540 Pfam Citrate transporter 27 487 IPR004680 GO:0016021|GO:0055085
Apr6g0676 540 MobiDBLite consensus disorder prediction 287 310 - -
Apr6g0676 540 MobiDBLite consensus disorder prediction 287 311 - -
Apr6g0676 540 PANTHER TRANSPORTER ARSB-RELATED 1 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0676 Apr-Chr6 10182435 10190934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0676 - - ccaj:109818851 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g2169 8 32234163 32240595 Apr6g0676 6 10182435 10190934 PCT