Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2136 ATGTCTCAGGTAGTGGCCACTCGATCCATTCACACCTCCCTCCCGCGCCCCACCGCAGGATATGCACACGACAGGGCTCAAACGTTGTTAAAGCCTCCAACTTTTGCTTCCAAACTGTTCCCCTCACAAATGAACAACCCCTCCAAAGTTTGCTCCAGAAGTTGCCTCATCTATGCAAGGAAATCTGCACCCACTGAAGTTGTCCCTGTGTCACCCGAGGATGATTCAAAGATTGAGGAGGAGTTGCAGCACTTGCGCGGCATGCAGCAACTTGGTGACACTTCTGTTGGAATGTGGTCTAAGCCCACGTTTAGGAGAAAGACAAAGATTGTTTGTACCATTGGTCCTTCTACCAACACCAGGGAAATGATTTGGAAGCTGGCTGAGGCTGGAATGAATGTTGCTCGTTTGAACATGTCTCACGGAGATCATGCTTCTCACCAGAAAGTGATTGATTTGGTTAAAGAATATAATGCTCAATCCAAGGACAATGTAATTGCAATTATGCTTGACACCAAGGGTCCTGAGGTTAGGAGCGGGGATTTGCCGCAACCAATCAATTTAACAAGTGGGCAGGAGTTCACTTTTACCATCCGGAGAGGTGTTGGAACTGCAGATTGTGTTAGCGTTAACTATGATGATTTTGTCAATGATGTGGAAGTGGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCTTTGATGGTTAAGTCTAAGACACAGGATTCTGTGAAATGTGAAGTTGTTGATGGAGGAGAGCTTAAGTCAAGGAGACATCTGAATGTTAGAGGGAAAAGTGCAACACTGCCTTCCATTACTGAGAAGGATTGGGATGACATCAAATTTGGAGTGGATAACAAAGTTGACTTCTATGCTGTTTCCTTTGTTAAAGATGCACAAGTAGTTCATGAACTGAAGAATTATTTGAAAAGCTGTGATGCTGATATACATGTCATTGTAAAAATTGAAAGTGCAGACTCTATACCGAACTTGCATTCAATTATTACAGCGTCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGTGCTGAGCTCCCTATTGAAGAGGTTCCACTTTTGCAGGAAGAGATAATCAGGATATGTCGTAGCATGGGAAAGGCTGTTATTGTGGCAACAAATATGTTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCAGAGGTATCGGATATTGCAATTGCTGTTCGAGAAGGTTCTGATGCAATAATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCACTAAAAGCCGTTAAAGTAATGCACACTGTAGCATTACGGACAGAAGCCACTATACCAGGTGGCCAAATGCCACCTAATGTTGGTCAAGTATTCAAGAACCACATGAGTGAGATGTTTGCTTACCATGCAACGATGATGTCTAATACTCTTGGAACCTCAACAGTTGTCTTCACTAGATCGGGCTTCATGGCTGTCCTTTTGAGCCACTACCGACCTTCTGGCACCATCTTTGCTTTTACAGATCAGAAGAGGATACAACAGAGGCTGGCTTTGTATCAAGGAGTCTGCCCTATTTACATGGAATTCTCTGAAGATGCTGAAGAGACGTTCACAAGAGCCTTGAATTTACTGCAGAAGCAAGGAATGGTAAAAGCAGGAGAAGAAGTAGCACTTGTACAAAGTGGCAGGCAACCCATATGGAGGTTCCAATCTACTCACAATATCCAGGTCCGAACAGTGTAA 1728 0.4416 MSQVVATRSIHTSLPRPTAGYAHDRAQTLLKPPTFASKLFPSQMNNPSKVCSRSCLIYARKSAPTEVVPVSPEDDSKIEEELQHLRGMQQLGDTSVGMWSKPTFRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPINLTSGQEFTFTIRRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMMSLMVKSKTQDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCDADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDAIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNVGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAVLLSHYRPSGTIFAFTDQKRIQQRLALYQGVCPIYMEFSEDAEETFTRALNLLQKQGMVKAGEEVALVQSGRQPIWRFQSTHNIQVRTV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2136 575 Gene3D - 448 575 IPR036918 -
Apr8g2136 575 PANTHER PLASTIDIAL PYRUVATE KINASE 2 43 575 - -
Apr8g2136 575 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Apr8g2136 575 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Apr8g2136 575 Gene3D - 108 433 IPR040442 -
Apr8g2136 575 Pfam Pyruvate kinase, alpha/beta domain 463 555 IPR015795 -
Apr8g2136 575 SUPERFAMILY PK C-terminal domain-like 424 575 IPR036918 -
Apr8g2136 575 MobiDBLite consensus disorder prediction 1 23 - -
Apr8g2136 575 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Apr8g2136 575 PANTHER PYRUVATE KINASE 43 575 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 Pfam Pyruvate kinase, barrel domain 106 441 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 TIGRFAM pyruv_kin: pyruvate kinase 106 575 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Apr8g2136 575 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 97 440 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2136 Apr-Chr8 31963039 31968396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2136 K00873 - gmx:100818193 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0609 6 8757489 8766554 Apr8g2136 8 31963039 31968396 PCT