Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2111 ATGGAGGTTGAGTTGGGACTCAAGATCACAAGAACCAGAGATGACATCACTTCTGTTTCTGATTTTCAATTTGCCAAAGACAAAACAGGACCTGTCTTCTTGTCAACAGAAACTGATGCAACCTTCAAGCTCACTGCACATCTTAAAGGATATAAGAAAGAAAACATTGACATAACTATAAGTAAAGATGGTACTCAGATTTCAGTGAGTGGGGAGAAGGAGGTGCAAGAAATGCAAATGATACAGTTCAAGAAAGAGCTTAAAATCAAAGGGTTTGCCAAGAAGTTTAAAATCCCTGATGGGGTGGTTTTGGATCGGATCAAGGCTAAGTATAATGAAGAGGATGCACTTTTGACAATTGTGATGCCAAAAGGGGAAATGGGAAAAGGAGGGTTTGGCATTGAGGAAGTGAAGGAAGAAGCAGAGTCAAGTATAGCAGAAGAAAAGGTTGTTGATAATAGTGTTACACCAGAACCAGAGCAAAGTTTAGTAGAAAAGGTTGCAGATAAGACTGAAGAGGAAACACCACCAGTGAAGAAGCGTGGTCCCAAAAAACCATGGAAGCCTTGTCCTCCTTTGTTTCTTGGAGGATCAACCTTGCTTGTATCTCTTATATTTCTTGTAATACACTATATTAGAGTCCGAAAGAGTTGA 654 0.3976 MEVELGLKITRTRDDITSVSDFQFAKDKTGPVFLSTETDATFKLTAHLKGYKKENIDITISKDGTQISVSGEKEVQEMQMIQFKKELKIKGFAKKFKIPDGVVLDRIKAKYNEEDALLTIVMPKGEMGKGGFGIEEVKEEAESSIAEEKVVDNSVTPEPEQSLVEKVADKTEEETPPVKKRGPKKPWKPCPPLFLGGSTLLVSLIFLVIHYIRVRKS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2111 217 Pfam Hsp20/alpha crystallin family 36 127 IPR002068 -
Apr8g2111 217 CDD ACD_sHsps-like 37 124 - -
Apr8g2111 217 SUPERFAMILY HSP20-like chaperones 36 126 IPR008978 -
Apr8g2111 217 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 140 IPR002068 -
Apr8g2111 217 Gene3D - 9 131 IPR008978 -
Apr8g2111 217 MobiDBLite consensus disorder prediction 154 185 - -
Apr8g2111 217 MobiDBLite consensus disorder prediction 163 181 - -
Apr8g2111 217 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 1 181 - -
Apr8g2111 217 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 183 215 - -
Apr8g2111 217 PANTHER HEAT SHOCK PROTEIN 26 183 215 IPR045045 -
Apr8g2111 217 PANTHER HEAT SHOCK PROTEIN 26 1 181 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2111 Apr-Chr8 31615065 31615789 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2111 - - aprc:113873754 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1296 6 18278414 18291749 Apr8g2111 8 31615065 31615789 PCT