Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1296 ATGGATCTGGAATTGGGACTCAAAATCACTAAAACTAGAGATGACATTGCTTCCATCTCTGAGTATCGATTAGCAAAGGACAGAGCAGGACCCATCTTTCAATCTAGAGAAACAAACACTATGTTCATCCTCAGTGCCCATCTTAAAGGTTATAAGAAGAATAACATTAACATCAAGATTAGTGAAGATGGTAGTAAGATATCAATTAGTGGAGAAAAGCCAGTTAAGGAAATTTTGATGATGGGATGGACAATGCATAAGAAAGAAATTGATGTTACGGGGTTCACTAAGGTTTTCAAAATTCCTGATGGGGTGAATTTGGATAGAATCAAAGCTAATTATGATGAGGAGGAATGGATATTGCATATCGTCATGCCAAAATTGGTAAAAGGGATCTGTGGGGCTAGGATTGAAGAAATCAAGGAAGAAGAAAAATCTAATGGAGGAAGATTAGAACTAGACAAAAGTGAAGCTGATCACATTGTTGATGGTGTTGGAGAGACAAGCCAAAAGGAATCTAAAGAATCTGAAGTTCAAGCAATGAAGGACAGTGAAGATTTTAAGGAGAAAAAGGAAGGAGGAGTATCTGACAAGAAGCTTGAGGATTCCAATAGGGAAATGAGTAAAGAGACAATAGATGAAGTAGTAGAAAAATATAAGTTGGGAATTGAAGATGGAAATGGAGAAAGTGTGAGAGAAAAGATTGGCAAGGAAGGAAATGAAGTAAAGAAGATGTCAGAAGTAGAGCAAAATGTTGGTGTAGGCATCTCACAAAAAATTGGAGATACTATCCAAAAAGAAAAAGAAGAATCTAAGTTGAGGATTGAGGATGGAAAGGTTGAAAGCATGATAGAAGAGGTTGACAAGGTAGCAAATGAAGCAGTGAAGCCATCAGAAATAGAGAAACAAGTAGGTACAACTATCCAGAAGAATGTTGGAGATACAAGTCAAGATAAAGAGTACGAGGTTCAGGAAATGGAAGACAATGGAGGTTTTGTAGAGAAGGAAAAAATGGTATATGAAAAGATGCTTGATGATGCCAACAGGAACACAATTGGAGTGGTGATCAAGAAAGAAATAGAAGAATCCAAGTTAGGAATTGAGGATAGAGATGGAGAAAATGTGAAAGAAAAAATTGGTAATGCAGGATATATAGCAATGAAGACATCAGAAATGGAGCCAAATGTAGGTGCACATATCACAAAGATAGCTGGAGATACAATCCAAGGGGGTTCTAAAGAGCCTGTTATTGAACAAATGGGGGAAGCTAAAAGTACTGTTGAGAAGATGGGGAGAGAGGAATCTAGAAAGATGCTTGCTGAGGACAATGTGTCTACCAAGTCAAATCAAAAACCATTTGGAGAACCTAAGTCTGAAACTGAGAATAGACTTGCAGAAAATGTGAAAGGAAGTAGTATGGAACTACTGGAAACAACGAAGACATCAGAACCTGACCAAAATGTAGCTGATCATATTCCTAGAAACATTGGGGGTATAAGCCAAGAAAATTTTAAAAAATCTAGGATTCAACAAAAGGAGAAAACTGAAAGCATAGAAGAGAAGATGGAGGTAGGGGAATCTGAAAGGATGCCTTTTCAAGCCGATGAGGATAGTCAGAAAAACAGATTCATAGATAGCATCCCAAAGGACATCAAAAAGCGTAAGACTGATACTGAAGATGGAGATCAAGAATGTTTCGAAGGAAAAGCTGATAAGGAAGGATTTGATGCAATGGTAACAGTGAGGGAAGAGTTTCCTAAGCAGTTACCAAATGCAGTAACTACTGAGGAAAACAAAGGGTTGAGCGTTTCAAAAATGCAAGAAACTGAAGAAGTCAAAGAAGCAATGATCAAAAGAAAAGGCAAAGAGATTCAACATTTTGTGGGTAAGGGTGAAGGTGAAGAACTCAAGAGGATGCATATGAAAGCAAAGAAAGCTTTTCCGAAAGAACAAATGCATGAAACAGAAGGTGTCAAAGAACCAATGGTAAAAAGAAAGAGAAAAGAAATTGAATGTTTTGCTGATAAAGGTGATGGTGAAGAACTCAAAAGGATGCATAAGGAAGAAAAAGACGAAGGGACAATACAAAACACTAAAGATGTCAAAGAAGCAATTGTCAAAAGAAAAGACAAAGATATTGAGTATCTTGCAGAAAATGGTGAAGGTAAAGAACCCAAAAGAATGCATACGGAAGCTAGGAAGGACTCAACAAAAGAGACGATGCAAGAAACTGAAGATGTCAAAGAAGCAACGGTTAAAAGAAAAGGCAAGGCTGTTCAACTTTTAGCAGATAAGAATGAAGGTGAACAAACAAAATGGAGGCATATGCAAGCAAAGAAGGACTCAACAAAAGAGACAATGCAACAAACTGAAGATGCCAAAGAAGCAATGGTTAAAAGAAAAGGCAAGGAAGTTCAACTTTTAGCAGATAAGGGTGAAGGTGAGGAACCCAAAATGATGCATATGGAAGCAAAGAAGGACTCAACAAAAGAGACAATGCAAGAAACTGAAAATCTCAACGAAGCAATGGTCAAAAGAAAAGGCAAAGAGACTAAATATTTTGCTGATAAGGGTGAAGGTGAAGAACCCGAAAGGATGCATATGGAAACAAAGAAAGACTTAACAAAAGAGATAATGCCAGAAACTGAAGATGTAAAAGAAGCAGTGGTCAACAGAAAAGGCAAGGGGGTTCAACTTTTGGAAGATAAGGATGGTGAAGGTGAAGAACACCAAACTATGCATAAGGAAGCAAAGGAGGACCTAACAAAAGAGACAATGCAAGAAACTGAAAATCTCAACGAAGCAATGGTCAAAAGAAAAGGCAAAGAGACTAAATATTTTGCTGATAAGGGTGAAGGTGAAGAACCCAAAAGGATGCATATGGAAACAAAGAAAGACTTAACAAAAGAGATAATGCCAGAAACAGAAGATGTAAAAGAAGCAGTGGTCAAAAGAAAAGGGAAGGGGGTTCAACTTTTGGAAGATAAGGATGGTGAAGGTGAAGAACACCAAACTATGCATAAGGAAGCAAAGGAGGACCTAACAAAAGAGACAATGCAAGAAACTAAAGATGTCAAAGAAGCACTGGTCAAAAGAAAAGACAAAGAAAGTGATTATTTTGTGGATAAGGGGGGAGGTGAAGAATTTAAAAGGGTGTACATGGAAACAAAGAAAGATATAAAAGAGACAATGCAAGAGGAAATTGGAAAGGGAAATGAGGATAGTGATCAGCAGAATGTATTAGAGAAAACTGTTAAAGGAAGATTTGAAGTATCAAAATGTACAACTGAAGAGTTGCCCAAGCAAGTAAGGGAGGAAGATGGAAGTAAAGGCTTCAAGGTTGCAAAGATGGAAGAACAAAAAAAGTTGATAAAAAAAGCAATGGCTGAAACTGAAAGTTCAATGGAAAAGGTGGAAGGGGAAGAATCCAAGGAGAGGACTGAGAAGGCAGGCAGGGTTATTGGCAAAAACCCAGTAATTGAGACCTTACAAAAGGAAGCCGAGGAGTCTATCATTGAAAGGAAGCCCGGAGATGGACCATATGTACCTGACACTATGGTCAAAGGAGTATTTGAAATGTCAGGGACTTTCCAAGCAAAGCTTCCCAAGCAATTGGTTGAGGCAATTGCCCAAGATAAGAAGGATAAAAATGAATATGCTATTGTGAAATTCAAAGGAGAAGGATCCATAAAGATGCATGTTGAACCAAATAAGGCTTTTGATGAGGACACAATTGAAAAAGAAATTATAAAGCCAAAACTTAAAGGTGACCAAATAAATGAGAAAGAAACTGTTTATGTTGGAATATGTGATGGAAACAAACCAAAGTTTCTGGAGATAGGGGAAACAGCGGATGTCAAAGAAGAGGGTGGAAAAATTGAAGAGTATGTGAAGAAAGTAGATGAAGACAAATATGAAGAGTCTGCTCGGCCTGAAAGAGAGGGTCCTAAGATCCAAACAAAGGGAAAAGGCCAACTTTCTTTGCAGGAAGATATTAGTGAAGGAAGATACGAAGAGAGCAAAACAGCGAGAGAGTTTCCTATGCAAATAGTAGATTCAGTTGCAAATACAAGAGAGGGGCCAAGGGATAAACAAATAGAAGCAGAAGAGGACACTAAAACAAAGAGAGAGAAAACAAAAGCTGCTGAGTCTACCCCAAAGGAAAAAATTCAAGAGCCTAAGAGTGAAAAAATCCTCCTGGCTTTTCATGAAGAACCAGAGGATAAACATCCAAAAGTAATAGAAAAAGGAACTTTTGAAAGAAAACCAGAGTCTACAAAAGGGCCAACCACACAACCAAAAGTATTAAGTATGGGATATGTGGAGGTTGAAAAAGGAAAAGCAAAGGAGAAGACACAGGAGACAAAGATGCTACCTCCAAAAGTTCAAACCAAGAAGACTCGTGATTCAAAAACTGAAAGCAAGAACCAAGATATCATGAAGCCAAAGAAACCAAAAGAAGTAGAAGGAGAACAGACAGAAAGCACTATAGCTGAAAGGATGGAAACCAAAAGAGACTTGAAAACAACTCCTGAAAGAAAAAAATACATGACAACTCAAAATGTTAAAGATGAGAAACACAGGATACAAGAAGAAAACAAGATACCTAAAATGCAAGAAACTCGGGAGAAAGATCATCAAATTGAATTAGAAGTCGTCACACCTAAAATGGAGGTGAAACCTCCACCAACAATTGAACTAACTGCAAAAAAAGGAGTTGAAAAATCAAAGAAGGAAGAGATGTCATCTATGCCTACGGCAATCCACAGAAAAGAACCTCATGAATCATCGTGGCCAAGCAAGGACTACAAAATTCTAAAGATAGAGAATGTACGACAAGAAAAGGAGGAGGGGGAAAGGGCCATTCATGCACTGAAACCAACTATTTCCAAAGAAGAATTTGCACAAGCTACGGCTACGCATTTAAAAGCAAAATGCAATGTTGAACTGAAAGATGAGATTGATAAGCCACAAGTAAATCAACTGCCATCTCCATCTGAAGAAATGTTGATCATAGAGCCATGTGAATTAGATAAATTTAGAAAGAAAGAAAATGATTCAAAGGACAAGAGTTTCGTGAAAATGCAAGGTAGAAAAGAATCAAAGGATCCCACAGAAGGCACTACAGCATCAGAAGTAGTAGCAGATGAAGTTGTTGAACCATCAAACTTATCAAGCACATCATCCACCCAACAATTTGGAGTTGAAGGAAAAGACAAAACAAATGCTCGTTATGAAGTTGGAGGCCAAGAATCTCAAGATTCAAAGAAGGACTCTGAAGAAGATGTTCAAGAGTCAACCGAAGGTAAAACAGACCAAGAAGTTGAACAAAGAGAAACAGTACAACCAGAGTCCCTTGCAGATCAACAATGCATAAGCAAAGATCAGGAAGAATTCCATGGAATATACAAAATTGAAGAAGAAAAAACCTATGAGCAAGGAGATGAAGCCCATGAAGATTCTCAAGTATTAGATGAGCAAAAAGAAAGTAAAGAGGAATCCACTAGAGGGAAAAAGGAAGACACAAAGAGGTCAAAGAAAATGTTTGTTTCTTTGATCATAGCAGGATCAGCCCTTTTAGCTTCTGGAATATTTATGTTTATTCGTCAAAGAAGATCCACAAAAAGCATAGCAAATCCATTCGTAATGCTGATCATGTTGAAAATCTTGGGAATGGAGTTTTTAATAGGACTGTTGCTTCCTTGTCTGAGTGAGGAGGATGTGTTCTGGTTGTCAGTTGCTTTGCTGAAAGGAGGGCTTGTACCTGATTTTGACATGCTCCAAGTTGAAAACGGAAGCATGACCACAGAAGAATATCATGCCTATTTCAGCATATGGGCATTGGCTAAGAAAATTGGAAAGAGCAGCACAATACATTCAGCAGAACTGGAACGCTTCCAAAAGGCAAATCCTGATATTGACTTTGAGATGAAGAGGTCAAACCTTGACCAGATCCAAGATCTAACTTGA 5970 0.3792 MDLELGLKITKTRDDIASISEYRLAKDRAGPIFQSRETNTMFILSAHLKGYKKNNINIKISEDGSKISISGEKPVKEILMMGWTMHKKEIDVTGFTKVFKIPDGVNLDRIKANYDEEEWILHIVMPKLVKGICGARIEEIKEEEKSNGGRLELDKSEADHIVDGVGETSQKESKESEVQAMKDSEDFKEKKEGGVSDKKLEDSNREMSKETIDEVVEKYKLGIEDGNGESVREKIGKEGNEVKKMSEVEQNVGVGISQKIGDTIQKEKEESKLRIEDGKVESMIEEVDKVANEAVKPSEIEKQVGTTIQKNVGDTSQDKEYEVQEMEDNGGFVEKEKMVYEKMLDDANRNTIGVVIKKEIEESKLGIEDRDGENVKEKIGNAGYIAMKTSEMEPNVGAHITKIAGDTIQGGSKEPVIEQMGEAKSTVEKMGREESRKMLAEDNVSTKSNQKPFGEPKSETENRLAENVKGSSMELLETTKTSEPDQNVADHIPRNIGGISQENFKKSRIQQKEKTESIEEKMEVGESERMPFQADEDSQKNRFIDSIPKDIKKRKTDTEDGDQECFEGKADKEGFDAMVTVREEFPKQLPNAVTTEENKGLSVSKMQETEEVKEAMIKRKGKEIQHFVGKGEGEELKRMHMKAKKAFPKEQMHETEGVKEPMVKRKRKEIECFADKGDGEELKRMHKEEKDEGTIQNTKDVKEAIVKRKDKDIEYLAENGEGKEPKRMHTEARKDSTKETMQETEDVKEATVKRKGKAVQLLADKNEGEQTKWRHMQAKKDSTKETMQQTEDAKEAMVKRKGKEVQLLADKGEGEEPKMMHMEAKKDSTKETMQETENLNEAMVKRKGKETKYFADKGEGEEPERMHMETKKDLTKEIMPETEDVKEAVVNRKGKGVQLLEDKDGEGEEHQTMHKEAKEDLTKETMQETENLNEAMVKRKGKETKYFADKGEGEEPKRMHMETKKDLTKEIMPETEDVKEAVVKRKGKGVQLLEDKDGEGEEHQTMHKEAKEDLTKETMQETKDVKEALVKRKDKESDYFVDKGGGEEFKRVYMETKKDIKETMQEEIGKGNEDSDQQNVLEKTVKGRFEVSKCTTEELPKQVREEDGSKGFKVAKMEEQKKLIKKAMAETESSMEKVEGEESKERTEKAGRVIGKNPVIETLQKEAEESIIERKPGDGPYVPDTMVKGVFEMSGTFQAKLPKQLVEAIAQDKKDKNEYAIVKFKGEGSIKMHVEPNKAFDEDTIEKEIIKPKLKGDQINEKETVYVGICDGNKPKFLEIGETADVKEEGGKIEEYVKKVDEDKYEESARPEREGPKIQTKGKGQLSLQEDISEGRYEESKTAREFPMQIVDSVANTREGPRDKQIEAEEDTKTKREKTKAAESTPKEKIQEPKSEKILLAFHEEPEDKHPKVIEKGTFERKPESTKGPTTQPKVLSMGYVEVEKGKAKEKTQETKMLPPKVQTKKTRDSKTESKNQDIMKPKKPKEVEGEQTESTIAERMETKRDLKTTPERKKYMTTQNVKDEKHRIQEENKIPKMQETREKDHQIELEVVTPKMEVKPPPTIELTAKKGVEKSKKEEMSSMPTAIHRKEPHESSWPSKDYKILKIENVRQEKEEGERAIHALKPTISKEEFAQATATHLKAKCNVELKDEIDKPQVNQLPSPSEEMLIIEPCELDKFRKKENDSKDKSFVKMQGRKESKDPTEGTTASEVVADEVVEPSNLSSTSSTQQFGVEGKDKTNARYEVGGQESQDSKKDSEEDVQESTEGKTDQEVEQRETVQPESLADQQCISKDQEEFHGIYKIEEEKTYEQGDEAHEDSQVLDEQKESKEESTRGKKEDTKRSKKMFVSLIIAGSALLASGIFMFIRQRRSTKSIANPFVMLIMLKILGMEFLIGLLLPCLSEEDVFWLSVALLKGGLVPDFDMLQVENGSMTTEEYHAYFSIWALAKKIGKSSTIHSAELERFQKANPDIDFEMKRSNLDQIQDLT* 1990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1296 1989 MobiDBLite consensus disorder prediction 644 663 - -
Apr6g1296 1989 SUPERFAMILY HSP20-like chaperones 31 128 IPR008978 -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1739 1781 - -
Apr6g1296 1989 Coils Coil 1114 1141 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 425 441 - -
Apr6g1296 1989 Coils Coil 819 846 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1720 1737 - -
Apr6g1296 1989 Gene3D - 29 131 IPR008978 -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 163 209 - -
Apr6g1296 1989 Gene3D Aldolase class I 1754 1973 IPR013785 -
Apr6g1296 1989 CDD ACD_sHsps-like 36 127 - -
Apr6g1296 1989 PANTHER - 590 731 - -
Apr6g1296 1989 PANTHER - 1 190 - -
Apr6g1296 1989 PANTHER - 901 1040 - -
Apr6g1296 1989 PANTHER - 1536 1875 - -
Apr6g1296 1989 PANTHER - 1041 1383 - -
Apr6g1296 1989 PANTHER - 719 865 - -
Apr6g1296 1989 PANTHER - 763 896 - -
Apr6g1296 1989 PANTHER - 994 1066 - -
Apr6g1296 1989 PANTHER - 1497 1533 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1443 1553 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1125 1157 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1125 1152 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1570 1599 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1809 1842 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 506 571 - -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 590 731 IPR045045 -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 901 1040 IPR045045 -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 994 1066 IPR045045 -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 1536 1875 IPR045045 -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 1041 1383 IPR045045 -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 763 896 IPR045045 -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 1 190 IPR045045 -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 719 865 IPR045045 -
Apr6g1296 1989 PANTHER HEAT SHOCK PROTEIN 26 1497 1533 IPR045045 -
Apr6g1296 1989 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 143 IPR002068 -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1300 1319 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 420 571 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1357 1423 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1300 1599 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1678 1706 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 472 488 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 716 1021 - -
Apr6g1296 1989 MobiDBLite consensus disorder prediction 1678 1791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1296 Apr-Chr6 18278414 18291749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1296 - - aprc:113866849 3886.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1296 6 18278414 18291749 Apr6g1296 6 18278414 18291749 ECH
Apr6g1296 6 18278414 18291749 Apr8g2111 8 31615065 31615789 PCT