Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2101 ATGGATACCAAGGGTCGATTGGTTGCAGGGTCACATAACAGGAATGAGTTTGTTCTTATCAATGCCGATGAGACTGCTAGAGTGAACGATGTTACAGAATTGAGTGGTCAAATTTGCCAGATCTGTGGGGATGAGATAGAGGTTACAGTGGATGGTGAACCATTTGTTGCTTGCAATGAATGTGCATTCCCTGTGTGCAGACCTTGCTATGAGTATGAAAGAAGAGAGGGAAACCAGGCTTGTCCTCAGTGCAAAACCAGATACAAGCGCATAAAGGGAAGTCCTAGAGTTGAGGGCGATGAAGAAGAAGAGGACACTGATGATTTGGATAATGAGTTTGACATTGGAAGCAACGTGAGGAGTGACCCTCATCACATTGCTGAGGCCTTGATCTCTTCTACTCGCTTCAACATTGTCCGTGGGTCTCAGATGACTGCTCCAGGGATTACCACACCGTCAGAGTTTGATGCAGCTTCTGTGGCTGCTGATATTCCCCTCCTGACTTATGATCACGAGGATGTTGGGATTTCTGCTGATAAACATGCTCTAATCATTCCCCCATGCATGCCTCGTGGGAAACGGGTTCATCCTATGCCTTTTCCTGATTCATCTGTTCCGGTTCAACCCAGACCCATGGATCCTAAAAAAGATTTAGCGGTTTATGGATATGGAAGTGTTGCATGGAAGGAACGAATGGAGGAGTGGAAGAAAAAGCAGAGTGGAAAAATTGAGGTGGTTAAGCATGAAGTGGATAACGATGATGGGAAAAATGGTGATGAGCTTGATGACCCTGATTTGCCAAAAATGGATGAAGGAAGGCAACCGCTATGGAGGAAGTTGCCAATTAGTCCAAGCAAGATAAACCCATATCGAATTATAATAGTACTTCGGATTGCTATTCTTGGCCTCTTTTTTCATTATAGAATTCTCCATCCAGTAAATGATGCATATGCATTATGGCTGACATCAGTAATATGTGAAATCTGGTTTGCTGTGTCATGGATATTGGATCAGTTCCCAAAATGGTGTCCAATTGAGAGAGAAACCTACCTTGATCGTTTGTCACTGAGGTACGAGAAAGAAGGAAGGCCATCTGAATTAGCTGATATAGACATATTTGTTAGTACAGTGGATCCTATGAAAGAACCTCCACTTATAACTGCAAACACAGTTCTGTCGATTCTTGCTGTGGATTATCCAGTGGATAAAGTTGCATGCTATGTCTCAGATGATGGTGCAGCTATGCTTACATTTGAAGCCCTTTCAGAGACTTCCGAGTTTGCAAGAAAGTGGGTTCCATTCTGTAAGAAGTTTAGCATTGAACCTCGGGCTCCTGAGTGGTACTTTGCTCAGAAGGTTGACTATCTGAAAGACAAAGTGGATGCAACTTTTATCAGGGAGCGTCGTGCTATTAAGAGGGAATATGAAGAGTTCAAAGTGCGGATTAATGCGTTGGTTGCAATGGCACAGAAGGTTCCTGAGGATGGTTGGACAATGCAAGATGGGACTCCATGGCCTGGAAATAATGTAAGAGATCATCCTGGAATGATTCAGGTTTTCCTTGGTCAAAATGGTGTTCGTGACCTTGAAGGGAATGAGTTGCCTCGTCTTGTCTATGTGTCACGTGAGAAAAGGCCTGGATTTGAACACCACAAAAAAGCTGGTGCTATGAATGCATTGGTGCGAGTTTCAGCAATCATATCCAATGCTCCTTACCTACTGAATGTTGATTGTGATCACTACATAAACAACAGTAAAGCACTTCGTGAGGCCATGTGCTTCATGATGGATCCTACGTCCGGGAAAAAAATATGCTATGTACAGTTTCCGCAAAGATTTGATGGGATTGATCGTCATGATAGATACTCAAATCGCAATGTTGTATTCTTTGATATCAACATGAAAGGTTTAGATGGCATCCAAGGACCAATATATGTGGGAACTGGGTGTGTCTTCAGGAGGCAAGCACTCTATGGATATGATGCCCCTGCTAAGAAAAAACCGCCAAGGAAGACATGTAACTGTTGGCCCAAATGGTGCTGCCTGTGTTGTGGATCTAGGAACAAGAACAGGAAAGTGAAGTCAGGTCCAAGAAAGAAGATAAAAAACAAGGATGCTACAAAGCAAATACATGCATTAGAAAATATTGAAGAGGGAATTGAAGGAATAGACAGTGAGAAGTCATGGTTAATGTCACAACTAAAATTTGAGAAAAAATTTGGGCAATCACCCGTTTTCATAGCTTCAACGCTTATGGAAGATGGGAGCATTCCAAAAGGAGCAACTTATGCATCACTCTTGAAGGAGGCCATCCATGTCATCAGTTGTGGTTATGAAGATAAGACAGAATGGGGTAAAGAGGTTGGATGGATATATGGTTCTGTTACAGAAGATATATTAACAGGTTTCAAGATGCACTGTCATGGGTGGCGATCTGTGTACTGCATGCCTAAAAGGCCTGCTTTTAAGGGTTCAGCTCCTATAAATCTTTCAGATCGTCTGCATCAAGTTCTTCGTTGGGCACTTGGATCTGTTGAGATCTTGTTGAGTAAGCATTGCCCTATATGGTATGGATATGGTTGTGGTTTGAAATGGCTAGAGCGCTTTTCTTACATAAACTCGGTCGTTTACCCTTTGACATCACTTCCCTTAATCGCCTATTGCACCTTGCCAGCTGTCTGTCTTCTCACTGGAAAGTTCATAGTTCCTGAGATTAGCAACTATGCTAGTATTGTTTTCATGGCACTCTTCATCTCTATAGCCGCAACTGGCATCCTGGAAATGCAATGGGGAGGTGTTGGCATACATGACTGGTGGAGGAATGAGCAGTTCTGGGTCATCGGTGGAGCCTCTTCACACCTCTTTGCTCTCTTTCAAGGTTTGCTCAAGGTTCTGGCAGGAGTTAACACAAACTTCACCGTCACATCCAAAGCTGCTGATGATGGAGAATTTGCTGAACTCTACCTTTTCAAGTGGACATCATTGTTGATCCCTCCTTTGACCTTACTTATCATAAACATAATTGGAGTTGTTGTAGGTGTTTCAGATGCAATAAACAATGGCTATGATTCATGGGGTCCCCTTTTTGGTAAGCTGTTTTTTGCTCTTTGGGTCATTCTCCATCTTTACCCATTCCTCAAGGGAGTTATGGGAAAACAAGAAGGTGTTCCTACCATAATTTTGGTTTGGGCTATTCTTCTGGCTTCAATCTTTTCTCTTCTATGGGTTAGGATTAACCCATTTTTGTCAAAAGGTGACATTGTGTTGGAACTTTGTGGGTTGAATTGTGACTAG 3294 0.4274 MDTKGRLVAGSHNRNEFVLINADETARVNDVTELSGQICQICGDEIEVTVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEEEEDTDDLDNEFDIGSNVRSDPHHIAEALISSTRFNIVRGSQMTAPGITTPSEFDAASVAADIPLLTYDHEDVGISADKHALIIPPCMPRGKRVHPMPFPDSSVPVQPRPMDPKKDLAVYGYGSVAWKERMEEWKKKQSGKIEVVKHEVDNDDGKNGDELDDPDLPKMDEGRQPLWRKLPISPSKINPYRIIIVLRIAILGLFFHYRILHPVNDAYALWLTSVICEIWFAVSWILDQFPKWCPIERETYLDRLSLRYEKEGRPSELADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFAQKVDYLKDKVDATFIRERRAIKREYEEFKVRINALVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDLEGNELPRLVYVSREKRPGFEHHKKAGAMNALVRVSAIISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPAKKKPPRKTCNCWPKWCCLCCGSRNKNRKVKSGPRKKIKNKDATKQIHALENIEEGIEGIDSEKSWLMSQLKFEKKFGQSPVFIASTLMEDGSIPKGATYASLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEILLSKHCPIWYGYGCGLKWLERFSYINSVVYPLTSLPLIAYCTLPAVCLLTGKFIVPEISNYASIVFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFAELYLFKWTSLLIPPLTLLIINIIGVVVGVSDAINNGYDSWGPLFGKLFFALWVILHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWVRINPFLSKGDIVLELCGLNCD* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2101 1097 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Apr8g2101 1097 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Apr8g2101 1097 Pfam Cellulose synthase 370 1086 IPR005150 GO:0016020|GO:0016760|GO:0030244
Apr8g2101 1097 SUPERFAMILY Nucleotide-diphospho-sugar transferases 383 895 IPR029044 -
Apr8g2101 1097 MobiDBLite consensus disorder prediction 92 111 - -
Apr8g2101 1097 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 512 664 IPR029044 -
Apr8g2101 1097 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1096 - -
Apr8g2101 1097 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Apr8g2101 1097 MobiDBLite consensus disorder prediction 249 269 - -
Apr8g2101 1097 PANTHER CELLULOSE SYNTHASE 1 1096 - -
Apr8g2101 1097 Pfam Zinc-binding RING-finger 31 105 IPR027934 -
Apr8g2101 1097 SUPERFAMILY RING/U-box 26 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2101 Apr-Chr8 31550765 31557332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g2101 1 1096 Glycosyltransferase AT2G21770 77.818 0.0 1773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2101 K10999 - gmx:100806786 1994.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1308 6 18451785 18459245 Apr8g2101 8 31550765 31557332 PCT