Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2056 ATGAAAATCGCAATCTTACAAATTTTAGGAATTTTATTCCTAAATGTTCTCCTTTCTTGCCAGGCACTAAGGCATCATAAATTTGTGGTTAGAGATGCCCCCTTCACAAAACTCTGCAGTACAAAGAACATCTTAACTGTAAATGGCCAATTTCCTGGCCCAACACTGTATGTTAACAAAGGAGAAACTATCATTGTTGATGTGTATAACCGAGCTAACTACAACATCACCATCCACTGGCATGGAGTGAACCAACCAAGATATCCATGGTCTGATGGCCCTGAATACGTCACACAATGTCCAATTCGACCAGGTGGAAAGTTCAGTCAGAAGGTTATATTTTCAGAAGAGGAAGGCACACTGTGGTGGCATGCTCACAGTGATTGGTCTCGAGCCACCGTTCACGGGGCTATTGTCGTTAAACCCAAGTCTGGAACTACCTATCCTTTTCCAAAACCACACAAAGAAGTCCCAATCATATTAGGTGAATGGTGGAAGAAAGATGTTGCTGAGGTTTACAATGATCTTCGTAGAACTGGAGGAGATGCTGCTCTTTCTGATGCTTATACAATCAATGGCCAACCCGGTGATCTTCACCCATGCTCGAAGAAAGAAACCTTCAAGCTTAGGGTTGATTATGGGAAAACCTATCTCCTCAGAATGGTGAATGCAGCAGTTCAAGACATTTTGTTCTTTGGCATTGCCAAACATCAACTCACAGTGGTAGGAACTGATGGTAGCTATGTGAAGCCAGTGAAGGTAGATTACATCACAATATCTCCTGGACAAACAATGGACGTGTTACTAGAAGCAAACCAACCATTAGATCGCTATTACATGGCTGCTAAAGTTTATTCAAGTGCTGTTGGGGTTAAATTTGACGACACCACTACCACTGCTATTGTGGAATATAGAGGAAAGCACATTCCATCGTCAAGTACCCCTTCCTTGCCTTTGCTTCCTGGTTTCAATGATACAAATGCCTCTATTAACCTGTTAAGTCAACTAAAAAGCTTGGCTGATCATGAACACCGAATTGATGTGCCCTTAGACATAAGCACCAACCTATTCTTCACAGCCTCAGTTAACACATTACCATGTCCCAATGGTTCAACGTGTAAGGGCCCAAATGGAAACCGGATCTCAGCAAGCATGAACAACATAAGCTTTGAATTGCCATCCAACAATAACATTTTAAATGCATACTACAACAACATTAATGGCGTTTTTGGGAAAAATTTCCCAGATGTTCCACCATTGCTATTTGATTTCACTGCCAACAGTCTCCCTACATCTCTAAACACACCTTCAGTCGATACTGAGGTGAATGTGCTTGAGTATAACTCAACGGTGGAGATTGTTCTTCAAGGGACTAACTTGTTGGCAGGTACAGAACACCCTATTCACCTGCACGGCTACAGTTTCTACGTGGTAGGGTGGGGATTTGGTAACTTCGACAAGGACAAGGACCCTCTCACCTACAATCTTGTTGACCCTCCTTATCAGAACACTGTTGCTATCCCCAAAAATGGTTGGACAGCCATAAGATTCAGGGCCAAAAATCCAGGTGTATGGTTCATGCACTGTCACTTAGAGCGTCATGTCACTTGGGGTATGGCTATGACTTTCATCGTCAAAAATGGTGACAACCCTGAAGAACAGATGCTGCCACCCCCGCCACACATGCCACAATGTTAA 1698 0.4299 MKIAILQILGILFLNVLLSCQALRHHKFVVRDAPFTKLCSTKNILTVNGQFPGPTLYVNKGETIIVDVYNRANYNITIHWHGVNQPRYPWSDGPEYVTQCPIRPGGKFSQKVIFSEEEGTLWWHAHSDWSRATVHGAIVVKPKSGTTYPFPKPHKEVPIILGEWWKKDVAEVYNDLRRTGGDAALSDAYTINGQPGDLHPCSKKETFKLRVDYGKTYLLRMVNAAVQDILFFGIAKHQLTVVGTDGSYVKPVKVDYITISPGQTMDVLLEANQPLDRYYMAAKVYSSAVGVKFDDTTTTAIVEYRGKHIPSSSTPSLPLLPGFNDTNASINLLSQLKSLADHEHRIDVPLDISTNLFFTASVNTLPCPNGSTCKGPNGNRISASMNNISFELPSNNNILNAYYNNINGVFGKNFPDVPPLLFDFTANSLPTSLNTPSVDTEVNVLEYNSTVEIVLQGTNLLAGTEHPIHLHGYSFYVVGWGFGNFDKDKDPLTYNLVDPPYQNTVAIPKNGWTAIRFRAKNPGVWFMHCHLERHVTWGMAMTFIVKNGDNPEEQMLPPPPHMPQC* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2056 565 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Apr8g2056 565 Pfam Multicopper oxidase 415 548 IPR011706 GO:0005507|GO:0016491
Apr8g2056 565 PANTHER MULTI-COPPER OXIDASE 12 565 IPR045087 -
Apr8g2056 565 CDD CuRO_3_LCC_plant 409 548 IPR034289 GO:0005507
Apr8g2056 565 Pfam Multicopper oxidase 32 144 IPR011707 GO:0005507
Apr8g2056 565 Gene3D - 154 341 IPR008972 -
Apr8g2056 565 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Apr8g2056 565 CDD CuRO_2_LCC_plant 157 304 IPR034285 -
Apr8g2056 565 SUPERFAMILY Cupredoxins 23 167 IPR008972 -
Apr8g2056 565 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Apr8g2056 565 TIGRFAM laccase: laccase 23 565 IPR017761 GO:0046274|GO:0048046|GO:0052716
Apr8g2056 565 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
Apr8g2056 565 Gene3D - 371 565 IPR008972 -
Apr8g2056 565 Gene3D - 24 151 IPR008972 -
Apr8g2056 565 PANTHER LACCASE 12 565 - -
Apr8g2056 565 SUPERFAMILY Cupredoxins 150 342 IPR008972 -
Apr8g2056 565 Pfam Multicopper oxidase 156 306 IPR001117 -
Apr8g2056 565 SUPERFAMILY Cupredoxins 375 565 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2056 Apr-Chr8 31197853 31200356 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2056 K05909 - qsu:112034097 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1423 6 22690431 22695697 Apr8g2056 8 31197853 31200356 PCT