Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1423 ATGGAACAGCAACATAATCTGAGTGTCCTACTACTCATTTTGGGGTTTCTGGTTGTCTGCAAGGTCCAAGGCAACGTTCATTATTATGATTTCGTTCTGAAGGAGAAAAACTTCACAAAGTTGTGCAGCACAAAAAGCATATTGACGGTGAACGATAGCTTTCCAGGGCCAACCATTCATGTTCAAAAGCGTGATACCGCTTTTGTTACTGTTCATAACCAAGGAAGATATGGGGTCACTATTCACTGGCATGGGGTAAGAGAACCAAGGGATCCTTGGTCAGATGGACCTGAGAACATAACACAATGCCCTATTCCACCAGGAACAAGTTTCACACAAAAGGTGGCCTTTACAGTGGAAGAAGGAACTCTTTGGTGGCATGCCCATAGTAGTTGGACTCGTGCCACTGTCCATGGTGCCATTGTCATTTTACCTGCCAATGGAACTTCATATCCTTTCCCTGAACCTTATCAACAAGAAACGCTTATCATTGGAGAATGGTATAAGGGAGATGTGATGCAAATTATAAATTCAGCCCTCGTAAATGGTGGCGAGCCCAATGCATCAGATGCTTACACCATCAATGGCCAACCTGGTGACTTGTATAATTGCTCAAGAGAAACAACATATCGCGTTCTAGTTGATTATGGAAAGACGTATCTTTTTCGTATAATAAATGCTGCAATGAACGAAGAACATTTCTTTGGGGTTGCTAATCACAACCTCTCAGTTGTAGGCATTGATGCTTCTTACACAAAGCCCTTAAACACCAATTTCATCATAATCACCCCTGGACAGACAATGGATGTATTGATCACAGCAAACCAACCAAAAGGTCTCTATTACATTGCTGCTAGGCCTTTTTATGATGGCATTGCCATGTATGACAATTCTACCACAACAGCTATTCTACAGTACAGTGGGAATTACACACCATCCTTATCCATTCCCATGCCTATGCTTCCTGCAGTGAATGACTCAGCAACAGTATTTAATTTTACTAAGAGCTTGAGGGGTTTGGCAAGCCAAAATCACCCTAACAATGTGCCAACAAATGTGACTAGAAAAATTTATATGACAGTATCCATGAATGAATTACCTTGCCAGAATCCAAATGGAAGTTGTTTAGGACCTAATGGAACGAGACTGGCTTCAAGTTTAAACAACATAAGTTTTCAGATTCCACAGATTGATATACTTAGAGCATACTACTGGAACATTTCAGGAGTTTTCACTGAAGACTTTCCGGATGAACCACCTTTCTTTTACAACTTCACAGGAGATGTGGGAGGAAATGCTTTATTCCCAAGCACAGGAACCAGGGTGCTAATGTTTGACTACAACGATGTTGTTGAACTTGTGTGGCAAGGAACTAGTCTTCTTACTGCAGAGAATCATGCAATGCACCTTCATGGTTTTAGCTTCTTTGCGGTGGGTGTTGGCACAGGAAATTTTAACAATGTGACAGACCCAAAATCCTACAATTTAATTGATCCACCAGAAGTTAATACCATTGGTCTTCCTAAGAATGGATGGATTGCCATGAGATTTGTTGCAAACAATCCAGGGGTCTGGTATATGCATTGTCATCTTGAAAGGCACACCAGTTGGGGTATGGATACTGTGCTCATTGTGAGAGATGGAGGTACCCCACAAACTAGCATTGTTCCACCTCCTAAATACTTGCCACCTTGTTCTCAATGA 1704 0.4155 MEQQHNLSVLLLILGFLVVCKVQGNVHYYDFVLKEKNFTKLCSTKSILTVNDSFPGPTIHVQKRDTAFVTVHNQGRYGVTIHWHGVREPRDPWSDGPENITQCPIPPGTSFTQKVAFTVEEGTLWWHAHSSWTRATVHGAIVILPANGTSYPFPEPYQQETLIIGEWYKGDVMQIINSALVNGGEPNASDAYTINGQPGDLYNCSRETTYRVLVDYGKTYLFRIINAAMNEEHFFGVANHNLSVVGIDASYTKPLNTNFIIITPGQTMDVLITANQPKGLYYIAARPFYDGIAMYDNSTTTAILQYSGNYTPSLSIPMPMLPAVNDSATVFNFTKSLRGLASQNHPNNVPTNVTRKIYMTVSMNELPCQNPNGSCLGPNGTRLASSLNNISFQIPQIDILRAYYWNISGVFTEDFPDEPPFFYNFTGDVGGNALFPSTGTRVLMFDYNDVVELVWQGTSLLTAENHAMHLHGFSFFAVGVGTGNFNNVTDPKSYNLIDPPEVNTIGLPKNGWIAMRFVANNPGVWYMHCHLERHTSWGMDTVLIVRDGGTPQTSIVPPPKYLPPCSQ* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1423 567 SUPERFAMILY Cupredoxins 21 169 IPR008972 -
Apr6g1423 567 Pfam Multicopper oxidase 34 146 IPR011707 GO:0005507
Apr6g1423 567 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Apr6g1423 567 PANTHER MULTI-COPPER OXIDASE 22 566 IPR045087 -
Apr6g1423 567 SUPERFAMILY Cupredoxins 350 565 IPR008972 -
Apr6g1423 567 PANTHER LACCASE 22 566 - -
Apr6g1423 567 CDD CuRO_2_LCC_plant 160 306 IPR034285 -
Apr6g1423 567 Gene3D - 349 567 IPR008972 -
Apr6g1423 567 Pfam Multicopper oxidase 432 547 IPR011706 GO:0005507|GO:0016491
Apr6g1423 567 Gene3D - 17 145 IPR008972 -
Apr6g1423 567 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
Apr6g1423 567 TIGRFAM laccase: laccase 25 565 IPR017761 GO:0046274|GO:0048046|GO:0052716
Apr6g1423 567 SUPERFAMILY Cupredoxins 153 344 IPR008972 -
Apr6g1423 567 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
Apr6g1423 567 Pfam Multicopper oxidase 161 309 IPR001117 -
Apr6g1423 567 Gene3D - 156 342 IPR008972 -
Apr6g1423 567 CDD CuRO_3_LCC_plant 410 548 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1423 Apr-Chr6 22690431 22695697 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1423 K05909 - gmx:100814128 1035.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1423 6 22690431 22695697 Apr6g1423 6 22690431 22695697 ECH
Apr6g1423 6 22690431 22695697 Apr8g2056 8 31197853 31200356 PCT