Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1689 ATGAATTCCTTTCAACAATTTGACTCTTCATCAAACACAGACACCAAAGCCATCAACCTCACACCAGGTACCACCTCCAATTTCGCATCACCCTCGCTACCAACACAACCACCACCACCCACATCATCATCACCATCATCACCACCATCATCATCATCGTCCTCCACCACTCTGAGTCGCTACGAAAACCAAAAGCGCCGAGACTGGAACACCTTTGGTCAGTACCTCAGAAACCACAGACCACCACTTTCCCTCTCTCGCTGCAGTGGTGCGCACGTGCTTGAATTCCTTAGGTACCTCGACCAGTTCGGGAAAACCAAGGTTCACACGCAGCTCTGTCCCTTCTTTGGGCACCCAAACCCACCTGCACCCTGCCCTTGTCCTCTACGCCAAGCATGGGGAAGCCTTGATGCTCTCATAGGTCGCCTCAGAGCTGCTTTTGAAGAAAACGGAGGCAAACCTGAGGCTAACCCTTTTGGTGCTCGTGCTGTGAGGCTTTATCTTCGTGAAGTGCGTGATTCACAAGCCAAAGCTAGAGGAATCAGCTACGAGAAAAAGAAGCGCAAGCGTCCCCAACAGCCTCCACCATTGCCTCCACCACCATCAAATAATGCTGCAAGTTAG 624 0.5144 MNSFQQFDSSSNTDTKAINLTPGTTSNFASPSLPTQPPPPTSSSPSSPPSSSSSSTTLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQLCPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPQQPPPLPPPPSNNAAS* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1689 207 MobiDBLite consensus disorder prediction 174 191 - -
Apr8g1689 207 MobiDBLite consensus disorder prediction 174 207 - -
Apr8g1689 207 Pfam ALOG domain 51 173 IPR006936 -
Apr8g1689 207 PANTHER G1-LIKE PROTEIN 1 199 - -
Apr8g1689 207 ProSiteProfiles ALOG domain profile. 60 187 IPR006936 -
Apr8g1689 207 MobiDBLite consensus disorder prediction 1 31 - -
Apr8g1689 207 MobiDBLite consensus disorder prediction 1 63 - -
Apr8g1689 207 PANTHER PROTEIN G1-LIKE2 1 199 IPR040222 -
Apr8g1689 207 MobiDBLite consensus disorder prediction 32 46 - -
Apr8g1689 207 MobiDBLite consensus disorder prediction 193 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1689 Apr-Chr8 27187834 27188457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1689 - - gmx:100806497 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1689 8 27187834 27188457 Apr8g1689 8 27187834 27188457 ECH
Apr8g1689 8 27187834 27188457 Apr8g0339 8 2857480 2858336 ECH
Apr8g1689 8 27187834 27188457 Apr4g0034 4 318259 319330 ECH