Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr8g0339 | ATGGATTCACTTCAAGAATTTATGGACTCGTGTAACTCAGACAACATGACCAACACAAACATCAGCACCACTAGCAGCAACAACAACAACGGCTTAATAATTGGTAGCTCCAATTCCCCTTCTGCTTCCTCCACCACAAGCAGTAGCCGCTATGAGAACCAAAAGCGCCGCGACTGGAACACCTTTGGCCAGTACCTCAAGAATCACCGTCCCCCTCTCTCCCTCTCAAGATGCAGTGGTGCACACGTCCTTGAATTTCTCAGGTACTTAGACCAATTTGGAAAGACCAAAGTGCACACTCCGATCTGTCCCTTTTATGGACACCCGAACCCTCCAGCACCATGTCCATGCCCCCTAAGACAAGCATGGGGTAGCCTTGATGCTCTCATAGGTCGCTTAAGAGCAGCCTTTGAGGAAAATGGAGGGAAGCCAGAAACAAACCCTTTTGGTGCTCGAGCTGTGAGACTCTACCTTCGTGAGGTTCGTGATCTGCAGTCCAAAGCAAGAGGAATCAGCTATGAGAAGAAGAAACGGAAGCGTCCACCACCACAACCACTACAACAAATACCACAATCACTTCCACTACCTCATCACCAACTCCCTCCTCCAGGTGCAACTCAATAA | 624 | 0.4904 | MDSLQEFMDSCNSDNMTNTNISTTSSNNNNGLIIGSSNSPSASSTTSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPQPLQQIPQSLPLPHHQLPPPGATQ* | 208 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr8g0339 | 207 | MobiDBLite | consensus disorder prediction | 8 | 50 | - | - | |
| Apr8g0339 | 207 | MobiDBLite | consensus disorder prediction | 183 | 207 | - | - | |
| Apr8g0339 | 207 | ProSiteProfiles | ALOG domain profile. | 50 | 177 | IPR006936 | - | |
| Apr8g0339 | 207 | PANTHER | G1-LIKE PROTEIN | 1 | 207 | - | - | |
| Apr8g0339 | 207 | MobiDBLite | consensus disorder prediction | 8 | 54 | - | - | |
| Apr8g0339 | 207 | PANTHER | PROTEIN G1-LIKE2 | 1 | 207 | IPR040222 | - | |
| Apr8g0339 | 207 | Pfam | ALOG domain | 42 | 163 | IPR006936 | - | |
| Apr8g0339 | 207 | MobiDBLite | consensus disorder prediction | 168 | 207 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr8g0339 | Apr-Chr8 | 2857480 | 2858336 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr8g0339 | - | - | gmx:100803605 | 290.041 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Apr8g0339 | 8 | 2857480 | 2858336 | Apr8g0339 | 8 | 2857480 | 2858336 | ECH | |
| Apr8g0339 | 8 | 2857480 | 2858336 | Apr4g0034 | 4 | 318259 | 319330 | ECH | |
| Apr8g1689 | 8 | 27187834 | 27188457 | Apr8g0339 | 8 | 2857480 | 2858336 | ECH | |
| Apr4g0854 | 4 | 6874195 | 6874758 | Apr8g0339 | 8 | 2857480 | 2858336 | PCT | |
| Apr8g0339 | 8 | 2857480 | 2858336 | Apr4g0034 | 4 | 318259 | 319330 | PCT |