Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1389 ATGTCACGTCCCGCACAGAACCTAATGCCCCTCGATTCAGACGAAGTACCCCCAACTCAAATACCAAACCCTCCCTCCAATTCTTCCTCAACCCTCCTTCACCTTTCCTTCAACCAGGACTCTGCCTGCTTCGCCGCCGCCACCGACCATGGCTTCCGCATCTACAACTGCGACCCTTTCCGCGAAATTTTCAGGCGAGACTTCGGTCCCGGCGGCGGAATCTCCCTCGTCCACATGCTTTTCCGCTGTAACATCCTCGCCTTCGTCGGCGGCGGCGTCCCCGAACCTCGCTACCCTCCCAACAAGGTCATGATTTGGGACGACCACCAGTCCCGCTGCATCGGCGAACTCTCCTTCCGCTCTGAAGTCAAAGGCGTTCGTCTCCGTCGCGACCGAATTGTTGTCGTTCTCGCGCATAAGATCTTTGTCTATAACTTCGCCGATCTCAAGGTCCTCCACCAAATCGAAACCATCGCCAACCCTAAAGGCCTCTGCGAAGTCTCTCACGTTTCGGGAACCATGGTTTTGGTGTGTCCTGGTTTGCAGAAGGGTCAGGTTAGAGTCGAGCATTACGCTTCCAAGAGAACCAAGTTCATCATGGCTCACGATTCGAGAATCGCGTGCTTCGCTCTCACACAGGATGGCCGTTTACTCGCTACTGCTAGCAGCAAAGGCACTCTCGTTAGGGTTTTCAACACCCTCGATGGTTCATTGCTTCAAGAGGTACGACGAGGTGCAGACAGAGCTGAAATATACAGCCTTGCATTCTCTCCTACTGCGCAGTGGTTAGCAGTGTCGAGCGACAAGGGAACGGTTCATGTTTTCAACCTGAAGGTTGATTCAGGACTGTTGGGGCATGACAGATCGCATAGTGCATCTGAGTCTAATACTGCCAGCCCCACCGCGGTTTCATCCCTCTCATTTATTAAAGGTGTGTTGCCTAAGTATTTTAGCTCAGAGTGGTCTGTGGCTCAGTTTCGCTTGCAAGAAGGATTGCAGTATATCGTTGCCTTTGGCCATCAGAAGAATACAGTTGTAATACTTGGCATGGATGGCAGCTTCTATCGATGCCAGTTTGATTCTGCAAACGGTGGAGAGATGACCCAACTTGAATATTACAATTTCCTAAAGCCAGAAGAGACATTCTAG 1149 0.5161 MSRPAQNLMPLDSDEVPPTQIPNPPSNSSSTLLHLSFNQDSACFAAATDHGFRIYNCDPFREIFRRDFGPGGGISLVHMLFRCNILAFVGGGVPEPRYPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFADLKVLHQIETIANPKGLCEVSHVSGTMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGRLLATASSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLLGHDRSHSASESNTASPTAVSSLSFIKGVLPKYFSSEWSVAQFRLQEGLQYIVAFGHQKNTVVILGMDGSFYRCQFDSANGGEMTQLEYYNFLKPEETF* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1389 382 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 21 382 - -
Apr8g1389 382 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 21 382 - -
Apr8g1389 382 MobiDBLite consensus disorder prediction 1 30 - -
Apr8g1389 382 Pfam WD domain, G-beta repeat 245 276 IPR001680 GO:0005515
Apr8g1389 382 Gene3D - 28 353 IPR015943 GO:0005515
Apr8g1389 382 SUPERFAMILY WD40 repeat-like 25 278 IPR036322 GO:0005515
Apr8g1389 382 SMART WD40_4 14 56 IPR001680 GO:0005515
Apr8g1389 382 SMART WD40_4 235 276 IPR001680 GO:0005515
Apr8g1389 382 SMART WD40_4 192 232 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1389 Apr-Chr8 21323367 21326057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1389 K22991 - gmx:100787427 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1389 8 21323367 21326057 Apr8g1389 8 21323367 21326057 ECH
Apr4g1082 4 9090986 9094317 Apr8g1389 8 21323367 21326057 PCT