Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1082 ATGTCAATTGCACCAGTTGATAGTATCCCCTCATTAAGCAGTGATCTCTTCTATGACATATTACGCCGACTTGATGGTGCAACATTGGCCAGTGCAGCGTGTACTTGTGCAGCATTGTGTTCCATCTCAAAAGAGGAAAGTTTATGGGAGAACGTATGTTCATCTATGTGGCCTTCAACCAACAGAGAAGATGTCAAAAGTTTAATCTCTTCTGTTGGTGGATTTAGAAAATTCTATGCAGACTGTTTTCCGCTTATTGTAAACAAGGAGGTTGTAGAGTATCAACAGAACAACCAACATGAGGAGTACCCTGACAATTGGACTGAAGCTGAATATTATGGGGACACAAGTGAATCTGAAAGCATCTCTCCATCAGATTTTGTTTCTATTGTAGATATTAGGTTCAAGGAGAAGACAATCTGTTCCAAAGTTCTCTGGGGAATTCCAAATGCAAATGGCTATGATAGTTGGTTCTATAACTGCCCTTTTCGGATCGATATTCTCACCTGTGCGGATAGAGATGACAACAATGATGGAGTGGTTAACCTTTCTGTATCTGATGGTCTGCCACCAATTACATCCTTGGAGAGGGAAAGGAAAGATGGTAAGCTGTGGCGCGAGCTCCGTGAAGGGCTCCAGCTTAGTTGGATTATAGTAAACCGGAAAATAAAACAAGCCGCGAATCTTGCTAGCTGGAGCCCTCTTGGTGGTCAAAGACATTGGCCAACAGATAAGGATTTTGTTATTCGCTTTGGATCAGTTCTACCTGCCAAGGACATTCTTCCTTGTCAGGTAGTGGAATGTATCCTTATTATGAAGTTTCGAGTTGTTCACACCGAAGAAGATGGGTTTCAAACAACTCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATCTTAATGGAAGAAACAGTTTGCAAATACTTAAGGAAGCACTTAGCAGCCGAAGGAGCAAAAATTATGGTGAAGTACTTGAGTCTTGTCACATGTATTCAAAAGTACAGAATGAATTGAAAGAGGAGAAGATGAGAAACGAAAGTAGGTTGGATAGACTTTGCATTTTAAGTGGCATTGCCGCATTTATGACATTCTGGTATTGCGTTTTATGA 1125 0.4107 MSIAPVDSIPSLSSDLFYDILRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADCFPLIVNKEVVEYQQNNQHEEYPDNWTEAEYYGDTSESESISPSDFVSIVDIRFKEKTICSKVLWGIPNANGYDSWFYNCPFRIDILTCADRDDNNDGVVNLSVSDGLPPITSLERERKDGKLWRELREGLQLSWIIVNRKIKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVVECILIMKFRVVHTEEDGFQTTLKLTELSMQLEDMEGAHLNGRNSLQILKEALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1082 374 PANTHER F-BOX PROTEIN-RELATED 4 370 IPR045283 -
Apr4g1082 374 PANTHER F-BOX PROTEIN-RELATED 4 370 - -
Apr4g1082 374 Gene3D - 2 108 - -
Apr4g1082 374 SUPERFAMILY F-box domain 5 79 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1082 Apr-Chr4 9090986 9094317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1082 - - gmx:100500689 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1082 4 9090986 9094317 Apr4g1082 4 9090986 9094317 ECH
Apr4g1082 4 9090986 9094317 Apr8g1389 8 21323367 21326057 PCT