Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1350 ATGGCTGAGATGGCAGAAAGCGAACGCCGGGTTCTGGTGGCGGTGGACGAAGGCGAGGAGAGCATGTACGCTCTTTCATGGTCTCTGAAGAACCTTGTTTTCCAAAATTCCAAGGACACGCTTATCCTCCTCTACGTCAAGCCTCCTCGTGCCGTTTATTCCGCCTTCGATGGCACTGGTTATTTGTTTTCCTCTGACATAACGGCAACCATGGAGAGGTACAGCCAACAAGTGGCTGATTGCGTCTTAGAGAAAGCGAAGAAATTGTGTGACAACATCGAAAACGTGGAGACGAGGGTAGAGCATGGCGACCCGAGGGACGTGATCTGTCAGATGGCTCAAAAGTTGGGTGTTGATGTCTTAGTGATGGGAAGCCATGGCTATGGTCTCATCAAGAGGGCTTTCCTTGGAAGTGTGAGCAATTACTGTGCACAGAACGTCAAGTGCCCCGTTTTGATTGTGAAGAAGCCAAAACCAACCTCCGGAGATATATAA 495 0.497 MAEMAESERRVLVAVDEGEESMYALSWSLKNLVFQNSKDTLILLYVKPPRAVYSAFDGTGYLFSSDITATMERYSQQVADCVLEKAKKLCDNIENVETRVEHGDPRDVICQMAQKLGVDVLVMGSHGYGLIKRAFLGSVSNYCAQNVKCPVLIVKKPKPTSGDI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1350 164 PRINTS Universal stress protein signature 8 26 IPR006015 -
Apr8g1350 164 PRINTS Universal stress protein signature 115 127 IPR006015 -
Apr8g1350 164 PRINTS Universal stress protein signature 133 155 IPR006015 -
Apr8g1350 164 CDD USP_Like 10 154 - -
Apr8g1350 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 160 - -
Apr8g1350 164 Gene3D HUPs 2 163 IPR014729 -
Apr8g1350 164 PANTHER OS05G0357525 PROTEIN 1 160 - -
Apr8g1350 164 Pfam Universal stress protein family 9 155 IPR006016 -
Apr8g1350 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1350 Apr-Chr8 20585900 20587048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1350 - - gmx:100305594 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1350 8 20585900 20587048 Apr8g1350 8 20585900 20587048 ECH
Apr4g0664 4 5482817 5483869 Apr8g1350 8 20585900 20587048 PCT