Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0664 ATGAGCGAAGAAGCAAGAAACGAACGGCGAGTGCTGGTGGCAGTGGACGCAGGTGAAGAAAGCGCTTACGCCCTTTCTTGGAGCCTCAAGAACATAGTTTTCCAAAATTCCAGAGATACCCTTATCCTTCTATACGTCAAGCACCATCAATCCTTTTTTACCCCCTTCGATGCCACAGGCAGAATGGATGATCCTCAAACTCCACCAATTTTGTTTTCCTCAGAGATAAACGCAACTATCGAGAAGTATAGCCAAGACGTGGCCGATTGCGTTATAGAGAAAGCCAAGAAATTATGTAAACATCTCCAACACGTTAAAGTGGAGACGAGGGTAGAGAGTGGAGACCCGAGGGAAGTGATATGCGAGATGTCTGAGAAGTTGGGTGCCGATGTGCTAGTCATGGGTAGCCACGGCTATGGTTTTATCAAGAGATCTTTCCTTGGAAGTGTGAGCGATTATTGCTCACAGAATGTCAAGTGCCCAGTTTTGATTGTAAAGAATCCAAAGCGAAGTGCCGATGCTGAAGAATAA 531 0.4576 MSEEARNERRVLVAVDAGEESAYALSWSLKNIVFQNSRDTLILLYVKHHQSFFTPFDATGRMDDPQTPPILFSSEINATIEKYSQDVADCVIEKAKKLCKHLQHVKVETRVESGDPREVICEMSEKLGADVLVMGSHGYGFIKRSFLGSVSDYCSQNVKCPVLIVKNPKRSADAEE* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0664 176 PRINTS Universal stress protein signature 8 26 IPR006015 -
Apr4g0664 176 PRINTS Universal stress protein signature 126 138 IPR006015 -
Apr4g0664 176 PRINTS Universal stress protein signature 144 166 IPR006015 -
Apr4g0664 176 CDD USP_Like 10 165 - -
Apr4g0664 176 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 168 - -
Apr4g0664 176 PANTHER OS05G0357525 PROTEIN 4 172 - -
Apr4g0664 176 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 4 172 - -
Apr4g0664 176 Pfam Universal stress protein family 9 166 IPR006016 -
Apr4g0664 176 Gene3D HUPs 3 176 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0664 Apr-Chr4 5482817 5483869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0664 - - aprc:113861976 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0664 4 5482817 5483869 Apr8g1350 8 20585900 20587048 PCT