Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1326 ATGGCTCCTGATATTACCAACGCTGCATCAAACGTCACCGACGCTCAAGCTAAGGTCACCGGCGGTCATGGCCGTGCTTACGTGACCTTCCTGGCTGGGAACGGTGACTATGTTAAAGGTGTTGTTGGGTTGGCCAAAGGTCTGAGAAAGGTGAAGAGCATGTACCCTCTGGTGGTTGCAGTGCTACCTGATGTTCCCCAAGAACACCGCAAGATTCTCACCTCTCAAGGTTGCATTGTTAGAGAGATTGAGCCCGTCTACCCCCCTAAGAACCAGACCCAGTTTGCCATGGCTTATTATGTCATCAACTATTCCAAGCTACGTATTTGGGAGTTTGTGGAGTACAGCAAGATGATATATCTAGACGGTGATATCCAAGTTTATGACAACATTGACCACTTGTTCGACTTGCCAAACAATTATTTCTATGCTGTGATGGACTGTTTCTGCGAGCCAACTTGGGGCCACACCCCTCAGTACCAGATCGGTTACTGTCAGCAGTGCCCTGATAAGGTTGAGTGGCCCTCTGATTTTGGGCCCAAGCCTCCTCTCTATTTCAACGCTGGAATGTTTGTTTATGAGCCTAACCTCGCTACCTACCGTGACCTCCTTGCAACAGTCCAAGTCACCAAGCCCACTTCCTTTGCTGAGCAGGATTTTTTGAACATGTACTTCAAGGACAAGTATAGGCCCATTCCTAACATATACAATCTTGTGCTGGCCATGCTGTGGCGTCACCCTGAGAATGTTGAGCTTGAGAAAGTCAAAGTGGTTCATTACTGTGCTGCTGGATCAAAGCCTTGGAGGTACACTGGGAAGGAGGAGAACATGGAGAGAGAAGATATAAAGATGTTAGTAAAGAAGTGGTGGGACATATATGAAGACGAGACCTTGGATTACAACAATCCCGTCAATGTGGATAAGTTCACGGCGGCGCTTTTGGAAGCTGGTGGAGTCAAGTTTGTTCCCGCTCCATCCGCTGCTTAG 987 0.4813 MAPDITNAASNVTDAQAKVTGGHGRAYVTFLAGNGDYVKGVVGLAKGLRKVKSMYPLVVAVLPDVPQEHRKILTSQGCIVREIEPVYPPKNQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYDNIDHLFDLPNNYFYAVMDCFCEPTWGHTPQYQIGYCQQCPDKVEWPSDFGPKPPLYFNAGMFVYEPNLATYRDLLATVQVTKPTSFAEQDFLNMYFKDKYRPIPNIYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGKEENMEREDIKMLVKKWWDIYEDETLDYNNPVNVDKFTAALLEAGGVKFVPAPSAA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1326 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Apr8g1326 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 301 IPR029044 -
Apr8g1326 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 328 - -
Apr8g1326 328 PANTHER GALACTINOL SYNTHASE 2 1 328 IPR030515 GO:0006012|GO:0047216
Apr8g1326 328 CDD GT8_Glycogenin 25 295 - -
Apr8g1326 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 298 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1326 Apr-Chr8 19902897 19904663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1326 1 328 Glycosyltransferase AT1G56600 74.556 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1326 K18819 - gmx:548050 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1326 8 19902897 19904663 Apr8g1326 8 19902897 19904663 ECH
Apr4g0648 4 5361924 5363774 Apr8g1326 8 19902897 19904663 PCT