Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0648 ATGGCTCCTGATATCACCACCGCTGCTGTCAATGCCACCACTGAGCAACCCAAAGCTGGTGGCGGAAGTGGCCGTGCCTTTGTTACTTTTCTTGCAGGAAACGGTGACTACATAAAGGGTGTTGTTGGTTTGGCCAAAGGGTTGAGAAAGGTTAAGAGCATCTACCCTTTGGTGGTTGCTGTCTTACCCGATGTTCCTGAAGAACATCGAAAGATTCTTAACTCCCAAGGTTGCATTGTCAGGGAGATTGAGCCTGTGTACCCACCCGAGAACCAAACCCAGTTTGCCATGGCCTATTATGTCATCAATTACTCAAAGCTACGTATTTGGGAGTTCGTGGAGTACAGCAAGATGATATACTTAGACGGTGACATTCAGGTTTTTGGAAATATCGACCATTTGTTTGATCTACCTGATAAGTACTTCTATGCGGTGATGGACTGTTTCTGCGAGAAGACTTGGAGCCACACTCCTCAGTATCAGATTGGGTACTGCCAACAATGCCCAGATAAGGTTCAGTGGCCCTCCGATTTTGGTCCCAAGCCTCCTTTGTATTTCAACGCTGGAATGTTTGTTTATGAGCCCAATCTTACCACATACCATGATCTTCTCCAAACAGTCCAAGTCACTAAGCCCACTTCCTTTGCTGAGCAGGACTTTTTGAACATGTACTTCAAGGACAAATACAAGCCCATACCTAACGTGTACAACCTTGTGCTGGCCATGTTGTGGCGTCACCCTGAGAATGTAGAACTTGAAAAAGTTAAAGTGGTTCACTACTGTGCTGCGGGGTCTAAGCCTTGGAGGTTCACTGGGAAGGAGCAGAACATGGACAGAGAAGACATAAAGATTCTTGTGAAGAAGTGGTGGGACATATACGAGGATGAGACACTGGACTATAATAACAACCCTGTCAACGTTGAACGCTTCACCAAAGCGCTATTGGAGGCTGGTGGCGTTAAGTTTGTGCCAGCCCCTTCCGCTGCATAA 990 0.4667 MAPDITTAAVNATTEQPKAGGGSGRAFVTFLAGNGDYIKGVVGLAKGLRKVKSIYPLVVAVLPDVPEEHRKILNSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFGNIDHLFDLPDKYFYAVMDCFCEKTWSHTPQYQIGYCQQCPDKVQWPSDFGPKPPLYFNAGMFVYEPNLTTYHDLLQTVQVTKPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRFTGKEQNMDREDIKILVKKWWDIYEDETLDYNNNPVNVERFTKALLEAGGVKFVPAPSAA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0648 329 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 329 - -
Apr4g0648 329 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 297 IPR029044 -
Apr4g0648 329 PANTHER GALACTINOL SYNTHASE 2 1 329 - -
Apr4g0648 329 CDD GT8_Glycogenin 25 295 - -
Apr4g0648 329 MobiDBLite consensus disorder prediction 1 21 - -
Apr4g0648 329 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 299 IPR029044 -
Apr4g0648 329 Pfam Glycosyl transferase family 8 29 270 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0648 Apr-Chr4 5361924 5363774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0648 1 329 Glycosyltransferase AT1G56600 75.740 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0648 K18819 - gmx:100800249 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0648 4 5361924 5363774 Apr8g1326 8 19902897 19904663 PCT