Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1274 ATGTTGTTCGGTGGAACAGACGTACCAGCAGTCATGAGGCGTTTCTCTGTGTTCTTGGTCTCTTGCTGGATTCTCCTTGGTCTCTGTCTTCTGAGTGTGTCATCTCAAAACATATCACAGAGTGACCTGCAAGCTAGCTTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGTTGGACAATTTCTGAAGAAGAATTCTTACAGAGTGCTGAAATAGTTTCTCAACGTCTCAAGGCTCATGGATATCAGTATGTTGTGGTAGATTACCTCTGGTACAGGAAGAAAGTCAAGGGTGCTTATCCTGATTCTCTTGGATTTGATGTGATTGATCAATGGGGAAGGATGATCCCTGACCCAGGAAGGTGGCCTTCTTCCCAAGGTGGGAAGGGGTTCAGCGAAGTAGCTAATAAAGTACATAGCTTGGGTTTAAAGTTTGGGATTCATGTAATGAGAGGGATAAGCACACAAGCTGCCAATGCAAACACCCCTATCCTAGATACAACAAAGGGAGATGCATATCAAGAATCTGGTCGAGTGTGGCGTGCAAAAGACATAGCAATCCCAGAAAGAGCTTGTGCATGGATGCCTCACGGTTTCATGAGTGTAAATACAAAGTTGGGAGCTGGAAGAGCTTTTTTGAGATCCCTTTATGAGCAGTATGCTGCGTGGGGTGTTGATTTCGTGAAACATGACTGTGTGTTCGGCGATGACTTGGATTTGAGTGAAATAACCTATGTATCAGAGGTTCTCAGCAAGCTTAGTCGCCCCATTGTGTATTCTCTGTCTCCTGGAACTAGTGTGACACCAGCCATGGCTAAAGATGTCCTTGGACTAGTCAACATGTATAGAATAACAGGAGATGACTGGGATACATGGGGGGATGTCAAGGCTCATTTTGATGTAACAAGGGATTTCTCTACAGCTAATATGATAGGAGGAAAAGGCTTAAAGGGAAATTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGTTCTAATGAAGGTCCACACAGGTATAGTAACCTCAATCTTGAAGAGAAAAGGACACAGATGACTTTGTGGTCTTTGGCTAAGTCTCCCCTCATGTATGGGGGGGATGTGCGGAAGATTGATCCTACCACATATGAAATTATCACAAATCCTACACTGCTAGAAATTAATTACTTCAGCTCAAATAATATGGAGTTTCCTTATGTCACAAGCTCGGAGATCTTGAAGCACAAACATGATCACCTAGAAGGGAAAAAGAGAATACCTAAGAAAGGAATAAAAGCATCATATACACATTCATTAGGTCTGACCAGCTGCACTGAATCAAAGGCAAGTGGTTGGTCTATTGAAAGTCTTAACCAAGATCTTGAAAGAATCTGTTGGAAAAAGAGTTTAGAAAGCAAGCATCTGGCCCCTTTCTGTGTACACAAGAGAGAACTTCTTTTCAGATTAGAAGGAGGGAGTATGTATCACGAGAATTATCAAGGGAAGCATCAATTAGTTGCAACTGACAGAATGAAGTTTTGTTTGGATGCTTCACCAAAACGAAAGATTACTTCTAAAGAGTTCAAGAGAGGTACATTTTCTCCTTGCCGATGGGATTCAAATCAGATCTGGGAGCTGAGCTCCAATGGTACCCTGGTAAATAGTTACTCTGGTCTTTGTGCGACCGTAGAATATGTCGAAGCTAATGTTAATTCTGGTGGTATTCGGTCTTGGATTGCAACGGGAAGGAAAGGGGAAATCTATCTTGCGTTCTTCAATCTAAGCGACGAGAAGACGGTGATATATGCAAAGACATCATATCTGGCCAGGGTTCTTCCTGACAAAAGCATCAATTCATGTAAGGGCAAGGAACTGTGGAGTGGAAAGGACGTAATAACAACGCAGGGGACGTTATCAATGAACGTGGAAGTTCATGGATGTGCACTATTTATTCTAAATTGTGACTAA 1962 0.4261 MLFGGTDVPAVMRRFSVFLVSCWILLGLCLLSVSSQNISQSDLQASFPPRGWNSYDSFCWTISEEEFLQSAEIVSQRLKAHGYQYVVVDYLWYRKKVKGAYPDSLGFDVIDQWGRMIPDPGRWPSSQGGKGFSEVANKVHSLGLKFGIHVMRGISTQAANANTPILDTTKGDAYQESGRVWRAKDIAIPERACAWMPHGFMSVNTKLGAGRAFLRSLYEQYAAWGVDFVKHDCVFGDDLDLSEITYVSEVLSKLSRPIVYSLSPGTSVTPAMAKDVLGLVNMYRITGDDWDTWGDVKAHFDVTRDFSTANMIGGKGLKGNSWPDLDMLPFGWLTDPGSNEGPHRYSNLNLEEKRTQMTLWSLAKSPLMYGGDVRKIDPTTYEIITNPTLLEINYFSSNNMEFPYVTSSEILKHKHDHLEGKKRIPKKGIKASYTHSLGLTSCTESKASGWSIESLNQDLERICWKKSLESKHLAPFCVHKRELLFRLEGGSMYHENYQGKHQLVATDRMKFCLDASPKRKITSKEFKRGTFSPCRWDSNQIWELSSNGTLVNSYSGLCATVEYVEANVNSGGIRSWIATGRKGEIYLAFFNLSDEKTVIYAKTSYLARVLPDKSINSCKGKELWSGKDVITTQGTLSMNVEVHGCALFILNCD* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1274 653 SUPERFAMILY (Trans)glycosidases 41 394 IPR017853 -
Apr8g1274 653 SUPERFAMILY Glycosyl hydrolase domain 569 651 - -
Apr8g1274 653 CDD GH27 48 393 IPR002241 GO:0004553|GO:0005975
Apr8g1274 653 PRINTS Glycosyl hydrolase family 27 signature 42 61 IPR002241 GO:0004553|GO:0005975
Apr8g1274 653 PRINTS Glycosyl hydrolase family 27 signature 136 157 IPR002241 GO:0004553|GO:0005975
Apr8g1274 653 PRINTS Glycosyl hydrolase family 27 signature 351 372 IPR002241 GO:0004553|GO:0005975
Apr8g1274 653 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 15 650 IPR002241 GO:0004553|GO:0005975
Apr8g1274 653 Gene3D - 566 652 IPR013780 -
Apr8g1274 653 Gene3D Aldolase class I 38 396 IPR013785 -
Apr8g1274 653 Pfam Alpha galactosidase A 61 158 IPR002241 GO:0004553|GO:0005975
Apr8g1274 653 Pfam Alpha galactosidase A 219 393 IPR002241 GO:0004553|GO:0005975
Apr8g1274 653 SUPERFAMILY Ricin B-like lectins 504 578 IPR035992 -
Apr8g1274 653 Pfam Alpha galactosidase C-terminal beta sandwich domain 571 650 IPR041233 -
Apr8g1274 653 PANTHER ALPHA-GALACTOSIDASE 15 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1274 Apr-Chr8 17809512 17815811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g1274 14 485 Glycoside Hydrolase AT3G26380 67.161 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1274 - - gmx:100783705 1174.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1274 8 17809512 17815811 Apr10g2240 10 34684203 34689711 PCT