Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1201 ATGCACCCCTTCTTCACTCTCATCAAACACCCCTTTTACTCCACTCAACTTCTCTCTTCTTGTGGCACACTCAACAACTTCAGCTATCAATATTTTATTATCATACATATTCATTGGTTACAAAGCCATCTTCACTTGTTTTGTGAATATACAGAAATGGGTGTTGGAGGCACACTGGAGTACTTGTCTGATCTAATGGGAAGTGGCTACCACCACAAGAAGAAGAAGCAGCAGTTACAGACTGTAGAGCTAAAGGTGAGGATGGACTGTGATGGCTGTGAGCTTAAGGTCAAGAAAGCCCTTTCTTCACTAAGTGGAGTGAAATCAGTGGAGATAAACCGTAAACAGCAGAAAGTGACAGTAACTGGGTATGTTGATCCAAACAAGGTGCTGAAGAAGGCTAAGTCAACAGGGAAGAAAGCTGAGATATGGCCATACGTGCCTTACAACTTGGTGGCTCATCCTTATGCTGCTCCAGCTTATGACAAGAAGGCTCCTCCTGGTTATGTGAGAAGAGTGGAGGTTTCTGCTAACAATGCAACCGTCACAAGATATGAAGACCCTTACATCACCATGTTCAGTGATGACAACCCAAATGCCTGCTCTATCATGTAG 615 0.4358 MHPFFTLIKHPFYSTQLLSSCGTLNNFSYQYFIIIHIHWLQSHLHLFCEYTEMGVGGTLEYLSDLMGSGYHHKKKKQQLQTVELKVRMDCDGCELKVKKALSSLSGVKSVEINRKQQKVTVTGYVDPNKVLKKAKSTGKKAEIWPYVPYNLVAHPYAAPAYDKKAPPGYVRRVEVSANNATVTRYEDPYITMFSDDNPNACSIM* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1201 204 ProSiteProfiles Heavy-metal-associated domain profile. 88 143 IPR006121 GO:0046872
Apr8g1201 204 Pfam Heavy-metal-associated domain 85 140 IPR006121 GO:0046872
Apr8g1201 204 Gene3D - 69 145 - -
Apr8g1201 204 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 56 204 IPR045181 GO:0046872
Apr8g1201 204 SUPERFAMILY HMA, heavy metal-associated domain 79 145 IPR036163 GO:0046872
Apr8g1201 204 CDD HMA 83 142 IPR006121 GO:0046872
Apr8g1201 204 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 56 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1201 Apr-Chr8 16947923 16948858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1201 - - aprc:113872880 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1201 8 16947923 16948858 Apr10g2185 10 34321144 34321846 PCT