Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2185 ATGGGTGTTGGAGGGTACTTGTCTGATCTAATGGGCAGTGGCTACCACCAGCAAAATAAGACCAAAAAGAAGCAATTACAAACCGTGGAGCTGAAGGTGAGGATGGATTGTGATGGCTGTGAGCTTAAGGTTAAGAAAGCTCTCTCTTCGTTAAATGGAGTGAAATCGGTGGAGATAAACAGGAAACAGCAGAAAGTGACAGTAACTGGGTATGTGGAAGCAACCAAGGTTCTAAAGAAGGCCAAGTCCACAGGGAAAAAAGCTGAGATTTGGCCTTATGTGCCTTATAACATGATGACTCATCCTTATGTTGCTTCAGCTTATGACAAGAAGGCTCCTCCTGGACATGTGAGGAGAGTGGACAACTCTGCCACCATTGGAACTGTGACATCATTTGAAGATCCATACATCACCATGTTCAGTGATGAAAACCCAAATGCATGCTCTATCATGTAG 456 0.4408 MGVGGYLSDLMGSGYHQQNKTKKKQLQTVELKVRMDCDGCELKVKKALSSLNGVKSVEINRKQQKVTVTGYVEATKVLKKAKSTGKKAEIWPYVPYNMMTHPYVASAYDKKAPPGHVRRVDNSATIGTVTSFEDPYITMFSDENPNACSIM* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2185 151 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 5 151 IPR045181 GO:0046872
Apr10g2185 151 ProSiteProfiles Heavy-metal-associated domain profile. 35 90 IPR006121 GO:0046872
Apr10g2185 151 CDD HMA 30 89 IPR006121 GO:0046872
Apr10g2185 151 SUPERFAMILY HMA, heavy metal-associated domain 26 92 IPR036163 GO:0046872
Apr10g2185 151 Gene3D - 14 92 - -
Apr10g2185 151 Pfam Heavy-metal-associated domain 32 87 IPR006121 GO:0046872
Apr10g2185 151 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 5 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2185 Apr-Chr10 34321144 34321846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2185 - - aprc:113872880 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g1201 8 16947923 16948858 Apr10g2185 10 34321144 34321846 PCT