Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0921 ATGGGGCGTGATGAGAGCACAAGCTCATTCTCCACCTTAGAAAGTGCTCAAGAGAAGGATCTCTCTTGTGTCCCTCAACAATATGTGATTCCAACCTTGCATAGGTCTAACTTAGCACCCAAAGAATATGCTAATGTTGCTGTTATTGACGTGGCTGCGCTTAAGAATGGCTTAGCAACAAGGTCTCGTGCTATTCAACAAATTAGAGATGCTTGTCGTCGTTTGGGTTTCTTTCAAGTTGTGAACCATGGAGTGAACGAATCAGTGCTTAATGAGGCCATATCCGTGGCTTCCAAATTCTTTGATTTGCCGACAAAGGAGAAGGTGAAGTTGTTGTCAAATGATGTGCACAAGCCAGTGAGGTATGGGACGAGCTTAAGAGATGGAATTGATAAGGTCCAGTTTTGGAGGGTTTTTCTCAAACACTATGCTTACCCTTTGAAGGATTGGATTCACATGTGGCCAGAAAATCCACCCGAGTACAGGGGAAAAATGGGAAGATATTGTGAAGAAGTGAAGAAAGTGGGCTTAGAGGTGATGACAGCACTCATTGAGAGTCTGGAATTAGATCCTACACTTCTAACCACAAAGATTGAAGATGGGATGCAAGTCATGGCAGTGAATTGCTACCCACCCTGCCCTGAGCCAGAGATTGCGCTTGGTTTACCACCACATTCTGACTATAGTTGCCTAACCATTTTGCACCAAAATTGCCCTGGGCTTGAGATAATGGATTTGGAGGATGGTACATGGAAAGTAGTGCCACACGTTGCTGGTGCCCTTCAAGTGCATGTTGGTGACCATTTTGAGGTATTGAGCAATGGTTTGTACAAGAGTATTGTGCACAGAGCAACCCTTAACAAGGACAGGACCAGGATCTCAATTACTAGTTTGTTCAGTTTGGGGATGGATGATAAAATGGAGACAGCTAAAGAGCTTGTGGATGATAAGCATCCTAAGAACTATAGGGAAAGCAGCTTCAGAGATTTTCTTAACTTTCTGGCATCCAATGACATTGCTGAAGGGAAGAATTTCATTGACATGCTCAAGATCAACTATAACTAA 1065 0.4338 MGRDESTSSFSTLESAQEKDLSCVPQQYVIPTLHRSNLAPKEYANVAVIDVAALKNGLATRSRAIQQIRDACRRLGFFQVVNHGVNESVLNEAISVASKFFDLPTKEKVKLLSNDVHKPVRYGTSLRDGIDKVQFWRVFLKHYAYPLKDWIHMWPENPPEYRGKMGRYCEEVKKVGLEVMTALIESLELDPTLLTTKIEDGMQVMAVNCYPPCPEPEIALGLPPHSDYSCLTILHQNCPGLEIMDLEDGTWKVVPHVAGALQVHVGDHFEVLSNGLYKSIVHRATLNKDRTRISITSLFSLGMDDKMETAKELVDDKHPKNYRESSFRDFLNFLASNDIAEGKNFIDMLKINYN* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0921 354 PANTHER KAR-UP OXIDOREDUCTASE 1 11 338 - -
Apr8g0921 354 SUPERFAMILY Clavaminate synthase-like 14 336 - -
Apr8g0921 354 Pfam 2OG-Fe(II) oxygenase superfamily 205 298 IPR044861 -
Apr8g0921 354 Pfam non-haem dioxygenase in morphine synthesis N-terminal 47 156 IPR026992 -
Apr8g0921 354 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 11 338 - -
Apr8g0921 354 Gene3D - 10 338 IPR027443 -
Apr8g0921 354 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 301 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0921 Apr-Chr8 10427611 10430085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0921 46 330 Glycosyltransferase AT5G59530 31.023 1.10e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0921 - - adu:107474430 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0252 4 2146121 2148682 Apr8g0921 8 10427611 10430085 PCT